Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Peptidase S54, rhomboid

Term: IPR002610  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene52143 SustainPine v3.0 420
AutoFact: rhomboid-like protein 14 [Arabidopsis thaliana] sp|Q8RXW0.1|Y3761_ARATH RecName: Full=Uncharacterized protein At3g17611 gb|AAL85014.1| unknown protein [Arabidopsis thaliana] gb|AAM51269.1| unknown protein [Arabidopsis thaliana] gb|AEE75979.1| rhomboid-lik 9.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene72324 SustainPine v3.0 194
AutoFact: RBL12; RBL12 (ARABIDOPSIS RHOMBOID-LIKE PROTEIN 12) 3.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene94222 SustainPine v3.0 227
AutoFact: Rhomboid domain containing protein 1.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene100260 SustainPine v3.0 455
AutoFact: [R] COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid) 3.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene102605 SustainPine v3.0 711
AutoFact: DUF793 domain containing protein 5.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene112092 SustainPine v3.0 683
AutoFact: SC35-like splicing factor 28 [Arabidopsis thaliana] gb|ABE66166.1| 28 kDa SC35-like splicing factor [Arabidopsis thaliana] gb|AED92615.1| SC35-like splicing factor 28 [Arabidopsis thaliana] 3.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: RNA recognition motif family protein, expressed 5.992e-07
Putative C-terminus
sp_v3.0_unigene121357 SustainPine v3.0 445
AutoFact: Uridine nucleosidase 1 [Arabidopsis thaliana] sp|Q9SJM7.2|URH1_ARATH RecName: Full=Uridine nucleosidase 1; AltName: Full=Uridine ribohydrolase 1 gb|AAL06843.1| At2g36310/F2H17.8 [Arabidopsis thaliana] gb|AAL47407.1| At2g36310/F2H17.8 [Arabidopsis thaliana 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pyrimidine-specific ribonucleoside hydrolase rihA 1.176e-08
Internal
sp_v3.0_unigene121666 SustainPine v3.0 421
AutoFact: Ribonuclease II, putative n=1 Tax=Ricinus communis RepID=B9T6X7_RICCO 2.0e-33
FL-Next: tr=Ribonuclease II, putative; Ricinus communis (Castor bean). 0.0
Sma3: Ribonuclease II-like protein 1.111e-09
Internal
sp_v3.0_unigene131840 SustainPine v3.0 196
AutoFact: Unassigned protein 4.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene138848 SustainPine v3.0 364
AutoFact: pfam05512, AWPM-19, AWPM-19-like family 6.02558e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Plasma membrane associated protein 1.428e-20
Internal
sp_v3.0_unigene148080 SustainPine v3.0 359
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene168261 SustainPine v3.0 206
AutoFact: Unassigned protein 4.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene189775 SustainPine v3.0 508
AutoFact: rhomboid-like protein 14 [Arabidopsis thaliana] gb|AEE75980.1| rhomboid-like protein 14 [Arabidopsis thaliana] 2.0e-27
FL-Next: sp=Uncharacterized protein At3g17611; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative C-terminus
sp_v3.0_unigene205987 SustainPine v3.0 546
AutoFact: Unassigned protein 9.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene208423 SustainPine v3.0 795
AutoFact: rhomboid-related intramembrane serine protease-like protein [Arabidopsis thaliana] ref|NP_001078681.1| rhomboid-related intramembrane serine protease-like protein [Arabidopsis thaliana] dbj|BAB10141.1| unnamed protein product [Arabidopsis thaliana] gb|AAS 3.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain