Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Histone H2A

Term: IPR002119  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene55916 SustainPine v3.0 370
AutoFact: Histone H2A (Fragment) n=1 Tax=Arabidopsis thaliana RepID=Q43286_ARATH 7.0e-21
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
N-terminus
sp_v3.0_unigene57979 SustainPine v3.0 450
AutoFact: Histone H2A n=8 Tax=Picea sitchensis RepID=A9P2B3_PICSI 3.0e-20
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
C-terminus
sp_v3.0_unigene58477 SustainPine v3.0 238
AutoFact: Histone H2A n=2 Tax=Physcomitrella patens subsp. patens RepID=A9S412_PHYPA 2.0e-14
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 5.188e-37
N-terminus
sp_v3.0_unigene66337 SustainPine v3.0 444
AutoFact: Thioredoxin M-type, chloroplastic n=4 Tax=Triticeae RepID=TRXM_WHEAT 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Thioredoxin m 4.498e-28
C-terminus
sp_v3.0_unigene66731 SustainPine v3.0 399
AutoFact: Histone H2A n=1 Tax=Oryza sativa Japonica Group RepID=B9GDH1_ORYSJ 4.0e-09
FL-Next: sp=Histone H2A; Pinus pinaster (Maritime pine). 0.0
Sma3: Histone H2A 0.0
Putative N-terminus
sp_v3.0_unigene67293 SustainPine v3.0 289
AutoFact: Histone H2A n=1 Tax=Sorghum bicolor RepID=C5YYL4_SORBI 1.0e-13
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
Putative N-terminus
sp_v3.0_unigene67553 SustainPine v3.0 247
AutoFact: Histone H2A n=2 Tax=Physcomitrella patens subsp. patens RepID=A9S412_PHYPA 3.0e-18
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 1.96182e-44
C-terminus
sp_v3.0_unigene67828 SustainPine v3.0 262
AutoFact: Histone H2A n=2 Tax=Physcomitrella patens subsp. patens RepID=A9S412_PHYPA 8.0e-12
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
C-terminus
sp_v3.0_unigene69106 SustainPine v3.0 225
AutoFact: Histone H2A n=2 Tax=rosids RepID=E3NYV0_9FABA 1.0e-07
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
C-terminus
sp_v3.0_unigene69144 SustainPine v3.0 230
AutoFact: alpha-L-fucosidase 3 [Arabidopsis thaliana] sp|Q9FXE5.1|FUCO3_ARATH RecName: Full=Alpha-L-fucosidase 3; AltName: Full=Alpha-1,2-fucosidase; Short=AtFXG1; AltName: Full=Alpha-L-fucoside fucohydrolase 3; Flags: Precursor gb|AAG28886.1|AC008113_2 F12A21.4 [A 4.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Alpha-L-fucosidase 2, putative 1.306e-20
Internal
sp_v3.0_unigene70732 SustainPine v3.0 380
AutoFact: Histone H2A n=2 Tax=Physcomitrella patens subsp. patens RepID=A9S412_PHYPA 5.0e-09
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 1.093e-16
N-terminus
sp_v3.0_unigene70839 SustainPine v3.0 243
AutoFact: Histone H2A n=2 Tax=Physcomitrella patens subsp. patens RepID=A9S412_PHYPA 7.0e-10
FL-Next: sp=Histone H2A; Pinus pinaster (Maritime pine). 0.0
Sma3: Histone H2A 3.979e-33
N-terminus
sp_v3.0_unigene71375 SustainPine v3.0 213
AutoFact: Histone H2A n=1 Tax=Chlorella variabilis RepID=E1Z345_9CHLO 8.0e-08
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 2.71e-06
Internal
sp_v3.0_unigene71612 SustainPine v3.0 170
AutoFact: Histone H2A n=2 Tax=Chlamydomonadales RepID=A8HRZ9_CHLRE 4.0e-15
FL-Next: sp=Histone H2A; Pinus pinaster (Maritime pine). 0.0
Sma3: Histone H2A 0.0
Internal
sp_v3.0_unigene72183 SustainPine v3.0 139
AutoFact: Histone H2A n=15 Tax=Embryophyta RepID=A5AKG7_VITVI 4.0e-08
FL-Next: sp=Histone H2A; Pinus pinaster (Maritime pine). 0.0
Sma3: Histone H2A 9.364e-21
Internal
sp_v3.0_unigene75695 SustainPine v3.0 284
AutoFact: thioredoxin m [Chlamydomonas reinhardtii] sp|P23400.3|TRXM_CHLRE RecName: Full=Thioredoxin M-type, chloroplastic; Short=Trx-M; AltName: Full=Thioredoxin-CH2; Flags: Precursor emb|CAA56851.1| thioredoxin m [Chlamydomonas reinhardtii] gb|EDP10052.1| thiored 1.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Thioredoxin m 1.097e-27
Putative C-terminus
sp_v3.0_unigene76550 SustainPine v3.0 229
AutoFact: uv excision repair protein rhp23 [Cryptococcus neoformans var. neoformans JEC21] gb|AAW41281.1| uv excision repair protein rhp23, putative [Cryptococcus neoformans var. neoformans JEC21] 8.0e-15
FL-Next: tr=RAD23; Pinus sylvestris var. mongolica. 0.0
Internal
sp_v3.0_unigene94863 SustainPine v3.0 368
AutoFact: Histone H2A n=1 Tax=Picea sitchensis RepID=A9NXR7_PICSI 1.0e-16
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
Putative N-terminus
sp_v3.0_unigene96128 SustainPine v3.0 521
Sma3: Histone H2A 1.224e-08
unknown
sp_v3.0_unigene97825 SustainPine v3.0 464
AutoFact: Histone H2A n=15 Tax=Embryophyta RepID=A5AKG7_VITVI 1.0e-33
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain