Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Histone H2A

Term: IPR002119  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene34928 SustainPine v3.0 1127
AutoFact: RAD23-like n=2 Tax=Solanum tuberosum RepID=Q38JH6_SOLTU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Uv excision repair protein rad23, putative 2.64e-11
N-terminus
sp_v3.0_unigene35389 SustainPine v3.0 882
AutoFact: RAD23 n=2 Tax=Pinaceae RepID=B5M6R6_PINSY 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA repair protein RAD23 1.078e-13
C-terminus
sp_v3.0_unigene35599 SustainPine v3.0 814
AutoFact: Histone H2A n=2 Tax=Physcomitrella patens subsp. patens RepID=A9S412_PHYPA 0.0
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
Complete
sp_v3.0_unigene36628 SustainPine v3.0 672
AutoFact: Histone H2A n=8 Tax=Picea sitchensis RepID=A9P2B3_PICSI 4.0e-26
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
Complete
sp_v3.0_unigene36636 SustainPine v3.0 845
AutoFact: Histone H2A n=1 Tax=Populus trichocarpa RepID=B9I7E7_POPTR 7.0e-36
FL-Next: sp=Histone H2A; Pinus taeda (Loblolly pine). 0.0
Sma3: Histone H2A 0.0
Complete
sp_v3.0_unigene36762 SustainPine v3.0 668
AutoFact: Histone H2A n=3 Tax=Piroplasmida RepID=A7AUI5_BABBO 2.0e-14
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 9.82001e-40
C-terminus
sp_v3.0_unigene36966 SustainPine v3.0 712
AutoFact: alpha-L-fucosidase 3 [Arabidopsis thaliana] sp|Q9FXE5.1|FUCO3_ARATH RecName: Full=Alpha-L-fucosidase 3; AltName: Full=Alpha-1,2-fucosidase; Short=AtFXG1; AltName: Full=Alpha-L-fucoside fucohydrolase 3; Flags: Precursor gb|AAG28886.1|AC008113_2 F12A21.4 [A 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Alpha-L-fucosidase 2, putative 6.195e-20
Putative N-terminus
sp_v3.0_unigene37023 SustainPine v3.0 506
AutoFact: beta-1,3 glucanase [Pisum sativum] 1.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glucan endo-1,3-beta-glucosidase, putative 5.772e-33
Internal
sp_v3.0_unigene37161 SustainPine v3.0 464
AutoFact: Glucan endo-1,3-beta-glucosidase, putative n=1 Tax=Ricinus communis RepID=B9RBE5_RICCO 1.00053e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glucan endo-1,3-beta-glucosidase, putative 9.47e-31
Internal
sp_v3.0_unigene39544 SustainPine v3.0 146
AutoFact: Histone H2A n=1 Tax=Malassezia globosa CBS 7966 RepID=A8Q409_MALGO 0.0001
FL-Next: sp=Histone H2A; Pinus pinaster (Maritime pine). 0.0
Sma3: Histone H2A 0.0
Internal
sp_v3.0_unigene42263 SustainPine v3.0 915
AutoFact: Histone H2A n=2 Tax=Physcomitrella patens subsp. patens RepID=A9S412_PHYPA 4.99997e-41
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
Complete
sp_v3.0_unigene42264 SustainPine v3.0 973
AutoFact: Histone H2A n=2 Tax=Physcomitrella patens subsp. patens RepID=A9S412_PHYPA 8.00001e-42
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
Complete
sp_v3.0_unigene42265 SustainPine v3.0 1088
AutoFact: Histone H2A n=15 Tax=Embryophyta RepID=A5AKG7_VITVI 9.99967e-42
FL-Next: sp=Histone H2A; Vitis vinifera (Grape). 0.0
Sma3: Histone H2A 0.0
Complete
sp_v3.0_unigene49560 SustainPine v3.0 801
AutoFact: Histone H2A n=2 Tax=Physcomitrella patens subsp. patens RepID=A9S412_PHYPA 9.94922e-44
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
Complete
sp_v3.0_unigene49562 SustainPine v3.0 411
AutoFact: Histone H2A n=1 Tax=Ectocarpus siliculosus RepID=D7FWI4_ECTSI 1.0e-23
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
C-terminus
sp_v3.0_unigene52183 SustainPine v3.0 155
AutoFact: Histone domain containing protein 3.0e-09
FL-Next: sp=Histone H2A; Pinus taeda (Loblolly pine). 0.0
Sma3: Histone H2A 0.0
Internal
sp_v3.0_unigene52254 SustainPine v3.0 204
AutoFact: Glycosyl hydrolase (Fragment) n=8 Tax=Picea RepID=F1C902_PICAB 2.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glucan endo-1,3-beta-glucosidase 7 8.099e-14
Internal
sp_v3.0_unigene53011 SustainPine v3.0 345
AutoFact: putative DNA repair protein RAD23-1 [Arabidopsis thaliana] gb|AEE36280.1| putative DNA repair protein RAD23-1 [Arabidopsis thaliana] 1.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Uv excision repair protein rad23, putative 1.884e-11
Putative Complete
sp_v3.0_unigene53212 SustainPine v3.0 384
AutoFact: Histone H2A n=8 Tax=Picea sitchensis RepID=A9P2B3_PICSI 2.0e-09
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
N-terminus
sp_v3.0_unigene55246 SustainPine v3.0 334
AutoFact: PREDICTED: histone cluster 1, H2bl-like n=1 Tax=Saccoglossus kowalevskii RepID=UPI0001CBC017 9.94922e-44
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain