Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, C2H2-like

Term: IPR015880  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene20230 SustainPine v3.0 657
• AutoFact: Putative transposase n=1 Tax=Arabidopsis thaliana RepID=O81190_ARATH 3.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: HAT family dimerisation domain containing protein 4.337e-08
Internal
sp_v3.0_unigene20665 SustainPine v3.0 1221
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene20674 SustainPine v3.0 603
• AutoFact: PAT1 multi-domain protein 3.0e-15
coding
sp_v3.0_unigene21316 SustainPine v3.0 972
• AutoFact: WD-40 repeat family protein [Arabidopsis thaliana] dbj|BAB09017.1| unnamed protein product [Arabidopsis thaliana] gb|AAL15328.1| AT5g67320/K8K14_4 [Arabidopsis thaliana] gb|AAN28871.1| At5g67320/K8K14_4 [Arabidopsis thaliana] gb|AED98328.1| WD-40 repeat f 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene21761 SustainPine v3.0 2653
• AutoFact: Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7MNY5_ARALL 1.0e-31
• FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 23; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Ubiquitin carboxyl-terminal hydrolase 2.189e-16
C-terminus
sp_v3.0_unigene21802 SustainPine v3.0 883
• AutoFact: ubiquitin thiolesterase/ zinc ion binding 1.0e-17
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Putative uncharacterized protein T17F15.240 9.747e-06
N-terminus
sp_v3.0_unigene21966 SustainPine v3.0 821
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: TRANSPARENT TESTA 1 protein, putative 5.034e-19
C-terminus
sp_v3.0_unigene22104 SustainPine v3.0 2211
• AutoFact: Peptidase C78, ubiquitin fold modifier-specific peptidase 1/ 2 [Arabidopsis thaliana] dbj|BAB09650.1| unnamed protein product [Arabidopsis thaliana] gb|AAL38717.1| unknown protein [Arabidopsis thaliana] gb|AAM51374.1| unknown protein [Arabidopsis thaliana 0.0
• FL-Next: tr=Os02g0106700 protein; Oryza sativa subsp. japonica (Rice). 0.0
Putative Complete
sp_v3.0_unigene22180 SustainPine v3.0 356
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nucleic acid binding protein, putative 7.803e-32
Internal
sp_v3.0_unigene22186 SustainPine v3.0 1246
• AutoFact: Zinc finger AN1 and C2H2 domain-containing stress-associated protein 16 n=3 Tax=Oryza sativa RepID=SAP16_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene22830 SustainPine v3.0 690
• AutoFact: aprataxin [Arabidopsis thaliana] sp|Q9M041.1|BH140_ARATH RecName: Full=Transcription factor bHLH140; AltName: Full=Basic helix-loop-helix protein 140; Short=AtbHLH140; Short=bHLH 140; AltName: Full=Transcription factor EN 122; AltName: Full=bHLH transcrip 5.0e-38
• FL-Next: sp=Transcription factor bHLH140; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene23827 SustainPine v3.0 1184
• AutoFact: pfam10604, Polyketide_cyc2, Polyketide cyclase / dehydrase and lipid transport 4.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Bet v I allergen-like 8.988e-18
Complete
sp_v3.0_unigene24353 SustainPine v3.0 343
• AutoFact: Unassigned protein 1.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene24699 SustainPine v3.0 1154
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene24801 SustainPine v3.0 312
• AutoFact: Putative AP2 domain-containing transcription factor (Fragment) n=1 Tax=Musa acuminata RepID=B5RHW0_MUSAC 4.0e-15
• FL-Next: tr=Transcription factor AP2; Taxus cuspidata (Japanese yew). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 8.294e-24
Internal
sp_v3.0_unigene24963 SustainPine v3.0 385
• AutoFact: Ethylene-responsive transcription factor ERF017 n=2 Tax=Arabidopsis RepID=ERF17_ARATH 3.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 5.95706e-41
N-terminus
sp_v3.0_unigene25164 SustainPine v3.0 707
• AutoFact: putative SET domain protein SDG117 [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: SET domain protein 6.216e-06
Putative Complete
sp_v3.0_unigene25382 SustainPine v3.0 753
• AutoFact: Ubiquitin carboxyl-terminal hydrolase (Fragment) n=3 Tax=Vitis vinifera RepID=E0CRZ8_VITVI 2.00386e-43
• FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 23; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Ubiquitin carboxyl-terminal hydrolase 6.606e-16
Putative N-terminus
sp_v3.0_unigene26023 SustainPine v3.0 983
• AutoFact: DUF659 domain containing protein 9.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene26039 SustainPine v3.0 1489
• AutoFact: SINA [Phyllostachys praecox] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin ligase SINAT2, putative 1.443e-07
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain