Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, C2H2-like

Term: IPR015880  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene161159 SustainPine v3.0 357
AutoFact: DUF659 domain containing protein 9.0e-25
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene161196 SustainPine v3.0 521
AutoFact: RVT_2 domain containing protein 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 1.828e-09
N-terminus
sp_v3.0_unigene161315 SustainPine v3.0 447
AutoFact: DUF659 domain containing protein 7.0e-23
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Chromosome chr9 scaffold_90, whole genome shotgun sequence 9.73e-06
Internal
sp_v3.0_unigene161347 SustainPine v3.0 351
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9SND3_RICCO 2.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene161544 SustainPine v3.0 228
AutoFact: Dimer_Tnp_hAT domain containing protein 0.0001
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene161553 SustainPine v3.0 235
AutoFact: DUF659 domain containing protein 2.0e-30
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene161645 SustainPine v3.0 179
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Internal
sp_v3.0_unigene161654 SustainPine v3.0 283
AutoFact: DUF659 domain containing protein 8.0e-34
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene161895 SustainPine v3.0 361
AutoFact: DUF659 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene161906 SustainPine v3.0 357
AutoFact: zf-LYAR domain containing protein 3.0e-11
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: RNA-binding protein 5.808e-07
Putative N-terminus
sp_v3.0_unigene162053 SustainPine v3.0 358
AutoFact: DUF659 domain containing protein 2.0e-34
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene162219 SustainPine v3.0 232
AutoFact: C2H2 type zinc finger protein [Arabidopsis thaliana] emb|CAA19718.1| hypothetical protein [Arabidopsis thaliana] emb|CAB79579.1| hypothetical protein [Arabidopsis thaliana] gb|ABN04797.1| At4g27240 [Arabidopsis thaliana] dbj|BAH30541.1| hypothetical prote 7.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: C2H2 zinc finger protein 2.341e-07
Internal
sp_v3.0_unigene162235 SustainPine v3.0 409
AutoFact: DUF659 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Sma3: HAT dimerisation domain-containing protein-like 2.778e-07
Internal
sp_v3.0_unigene162759 SustainPine v3.0 324
AutoFact: Unassigned protein 7.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene162896 SustainPine v3.0 235
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene163163 SustainPine v3.0 285
AutoFact: DUF659 domain containing protein 5.0e-28
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene163408 SustainPine v3.0 407
AutoFact: ATP-dependent RNA helicase (Fragment) n=1 Tax=Cucumis melo subsp. melo RepID=E5GBQ6_CUCME 0.0
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: ATP-dependent RNA helicase, putative 1.112e-31
Internal
sp_v3.0_unigene163481 SustainPine v3.0 376
AutoFact: Putative AP2 domain-containing transcription factor (Fragment) n=1 Tax=Musa acuminata RepID=B5RHW0_MUSAC 4.0e-11
FL-Next: tr=Transcription factor AP2; Taxus cuspidata (Japanese yew). 0.0
Sma3: Dehydration responsive element binding protein 2.764e-09
Internal
sp_v3.0_unigene164034 SustainPine v3.0 161
AutoFact: DUF659 domain containing protein 9.0e-20
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Chromosome chr9 scaffold_90, whole genome shotgun sequence 6.292e-06
Internal
sp_v3.0_unigene164125 SustainPine v3.0 374
AutoFact: DUF659 domain containing protein 9.0e-28
FL-Next: tr=Putative uncharacterized protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Sma3: HAT family dimerisation domain containing protein 2.101e-09
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain