Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, C2H2-like

Term: IPR015880  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene137987 SustainPine v3.0 314
AutoFact: Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Oryza sativa Japonica Group RepID=Q5SMN5_ORYSJ 4.0e-23
FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 23; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Ubiquitin carboxyl-terminal hydrolase 2.514e-16
Internal
sp_v3.0_unigene138153 SustainPine v3.0 251
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene139454 SustainPine v3.0 440
AutoFact: zinc binding motif and SET domain-containing protein [Arabidopsis thaliana] gb|AEC07483.1| zinc binding motif and SET domain-containing protein [Arabidopsis thaliana] 3.0e-37
FL-Next: sp=Histone-lysine N-methyltransferase SUVR5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene139463 SustainPine v3.0 360
AutoFact: Putative zinc finger protein n=1 Tax=Cucumis sativus RepID=Q5NDD4_CUCSA 1.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene140474 SustainPine v3.0 693
AutoFact: DUF659 domain containing protein 2.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene140584 SustainPine v3.0 775
AutoFact: zinc finger protein 706, gene 2 [Xenopus laevis] gb|AAH74174.1| MGC81992 protein [Xenopus laevis] 1.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene140739 SustainPine v3.0 385
AutoFact: AP2/ERF domain-containing transcription factor n=1 Tax=Populus trichocarpa RepID=A9PLA1_POPTR 5.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AP2 domain transcription factor-like 1.176e-17
N-terminus
sp_v3.0_unigene141213 SustainPine v3.0 389
AutoFact: DUF659 domain containing protein 3.0e-16
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Chromosome chr9 scaffold_90, whole genome shotgun sequence 4.763e-06
Internal
sp_v3.0_unigene141335 SustainPine v3.0 288
AutoFact: DUF659 domain containing protein 6.0e-31
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene141534 SustainPine v3.0 433
AutoFact: Nucleic acid binding protein, putative n=1 Tax=Ricinus communis RepID=B9RBR6_RICCO 2.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene142042 SustainPine v3.0 441
AutoFact: Beta-glucosidase, putative n=1 Tax=Ricinus communis RepID=B9SAQ1_RICCO 7.9874e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Beta-glucosidase, putative 0.0
Internal
sp_v3.0_unigene142216 SustainPine v3.0 436
AutoFact: Dehydration-responsive element binding protein 3 n=1 Tax=Glycine max RepID=Q2VEU3_SOYBN 3.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: RAP2-like protein 2.713e-27
N-terminus
sp_v3.0_unigene142461 SustainPine v3.0 563
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] emb|CAB71884.1| putative zinc-finger protein [Arabidopsis thaliana] gb|AAO29956.1| putative zinc-finger protein [Arabidopsis thaliana] gb|AAQ56798.1| At3g62240 [Arabidopsis thaliana] gb|AEE80326. 6.0e-11
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene142671 SustainPine v3.0 140
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene142891 SustainPine v3.0 301
AutoFact: Putative MYST-like histone acetyltransferase 1 n=12 Tax=Poaceae RepID=MYST1_ORYSJ 2.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone acetyltransferase 3.995e-15
C-terminus
sp_v3.0_unigene142985 SustainPine v3.0 373
AutoFact: AP2/ERF domain-containing transcription factor n=1 Tax=Populus trichocarpa RepID=A9PLA4_POPTR 2.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AP2/ERF domain-containing transcription factor 6.65e-28
N-terminus
sp_v3.0_unigene143390 SustainPine v3.0 438
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene144274 SustainPine v3.0 815
AutoFact: Dimer_Tnp_hAT domain containing protein 0.0001
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene144594 SustainPine v3.0 657
AutoFact: Lim domain protein n=2 Tax=Pinaceae RepID=F4MKL9_PINPS 3.0e-23
FL-Next: tr=Lim domain protein; Pinus pinaster (Maritime pine). 0.0
Sma3: Pollen-specific protein SF3, putative 2.573e-22
N-terminus
sp_v3.0_unigene144733 SustainPine v3.0 489
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RM85_RICCO 1.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain