Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, C2H2-like

Term: IPR015880  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene113636 SustainPine v3.0 538
AutoFact: DUF659 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: HAT dimerisation domain-containing protein-like 5.092e-07
Putative Complete
sp_v3.0_unigene113880 SustainPine v3.0 465
AutoFact: DUF659 domain containing protein 1.0e-39
FL-Next: tr=Putative uncharacterized protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Sma3: Chromosome chr9 scaffold_90, whole genome shotgun sequence 9.9e-06
Internal
sp_v3.0_unigene113929 SustainPine v3.0 384
AutoFact: Myosin XI, putative n=1 Tax=Ricinus communis RepID=B9RQX7_RICCO 0.0
FL-Next: tr=Myosin XI, putative; Ricinus communis (Castor bean). 0.0
Sma3: Myosin 2.969e-24
Internal
sp_v3.0_unigene113995 SustainPine v3.0 424
AutoFact: dicer-like protein [Oryza sativa Indica Group] 3.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene114247 SustainPine v3.0 533
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene114655 SustainPine v3.0 480
AutoFact: HAT family dimerization domain-containing protein n=1 Tax=Arabidopsis thaliana RepID=F4KHA1_ARATH 4.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene116071 SustainPine v3.0 520
AutoFact: DUF1777 multi-domain protein 1.0e-17
coding
sp_v3.0_unigene117241 SustainPine v3.0 295
AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9S9D0_RICCO 3.0e-26
FL-Next: sp=Putative uncharacterized protein At4g01020, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene119909 SustainPine v3.0 325
AutoFact: Streptomyces cyclase/dehydrase family protein [Brassica oleracea] 2.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AT-rich element binding factor 3 3.593e-16
Internal
sp_v3.0_unigene121966 SustainPine v3.0 393
AutoFact: myosin-like protein [Arabidopsis thaliana] emb|CAB80037.1| myosin-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Sma3: Myosin XI 1.439e-28
Internal
sp_v3.0_unigene122056 SustainPine v3.0 898
AutoFact: fiber protein Fb2 [Gossypium barbadense] 5.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fiber protein Fb2 2.876e-15
N-terminus
sp_v3.0_unigene122169 SustainPine v3.0 246
AutoFact: Myosin XI, putative n=1 Tax=Ricinus communis RepID=B9S596_RICCO 6.0e-35
FL-Next: tr=Myosin XI, putative; Ricinus communis (Castor bean). 0.0
Sma3: Myosin 1.368e-24
Internal
sp_v3.0_unigene122339 SustainPine v3.0 327
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
sp_v3.0_unigene123138 SustainPine v3.0 150
AutoFact: Dimer_Tnp_hAT domain containing protein 4.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene123250 SustainPine v3.0 352
AutoFact: putative DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 8 (RNA helicase) [Oryza sativa Japonica Group] 1.0e-26
FL-Next: sp=Putative uncharacterized protein At4g01020, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene123779 SustainPine v3.0 178
AutoFact: C2H2 type zinc finger protein [Arabidopsis thaliana] emb|CAA19718.1| hypothetical protein [Arabidopsis thaliana] emb|CAB79579.1| hypothetical protein [Arabidopsis thaliana] gb|ABN04797.1| At4g27240 [Arabidopsis thaliana] dbj|BAH30541.1| hypothetical prote 9.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: C2H2 zinc finger protein 9.335e-08
Internal
sp_v3.0_unigene123941 SustainPine v3.0 734
AutoFact: Beta-glucosidase 40 n=2 Tax=Arabidopsis RepID=BGL40_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Beta-glucosidase, putative 4.21001e-40
Internal
sp_v3.0_unigene124070 SustainPine v3.0 236
AutoFact: MRNA splicing factor ATP-dependent RNA helicase (ISS) n=1 Tax=Ostreococcus tauri RepID=Q01DF3_OSTTA 1.0e-15
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Internal
sp_v3.0_unigene124952 SustainPine v3.0 395
AutoFact: Bipolar kinesin KRP-130, putative n=1 Tax=Ricinus communis RepID=B9SWG6_RICCO 2.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 5.991e-17
Internal
sp_v3.0_unigene125753 SustainPine v3.0 396
AutoFact: zinc finger-related and helicase and IBR domain-containing protein [Arabidopsis thaliana] sp|P0CE10.1|Y4102_ARATH RecName: Full=Putative uncharacterized protein At4g01020, chloroplastic; Flags: Precursor gb|AEE81967.1| zinc finger-related and helicase and 1.0e-27
FL-Next: sp=Putative uncharacterized protein At4g01020, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: ATP-dependent RNA helicase, putative 2.412e-06
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain