Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, C2H2-like

Term: IPR015880  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene107132 SustainPine v3.0 471
• AutoFact: DUF659 domain containing protein 7.9874e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene107736 SustainPine v3.0 246
• AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9SVA9_RICCO 8.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Protein binding protein, putative 2.099e-06
Internal
sp_v3.0_unigene107807 SustainPine v3.0 388
• AutoFact: myosin class 11-2 [Adiantum capillus-veneris] 3.0e-37
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
• Sma3: Myosin XI, putative 2.641e-23
Internal
sp_v3.0_unigene107908 SustainPine v3.0 588
• AutoFact: Dicer-like protein n=1 Tax=Populus trichocarpa RepID=B9HHX6_POPTR 4.00001e-40
• FL-Next: sp=Endoribonuclease Dicer homolog 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Dicer-like protein 3.417e-20
N-terminus
sp_v3.0_unigene108514 SustainPine v3.0 427
• AutoFact: Putative ATP-dependent RNA helicase n=1 Tax=Oryza sativa RepID=Q9FW67_ORYSA 0.0
• FL-Next: sp=Putative uncharacterized protein At4g01020, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: ATP-dependent RNA helicase, putative 2.923e-18
Internal
sp_v3.0_unigene109895 SustainPine v3.0 391
• AutoFact: Ubiquitin carboxyl-terminal hydrolase (Fragment) n=3 Tax=Vitis vinifera RepID=E0CRZ8_VITVI 1.0e-32
• FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 23; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Ubiquitin carboxyl-terminal hydrolase 5.995e-19
Internal
sp_v3.0_unigene109933 SustainPine v3.0 449
• AutoFact: dicer-like protein 4 [Arabidopsis thaliana] sp|P84634.2|DCL4_ARATH RecName: Full=Dicer-like protein 4 gb|AAZ80387.1| dicer-like 4 [Arabidopsis thaliana] gb|AED92830.1| dicer-like protein 4 [Arabidopsis thaliana] 1.0e-23
• FL-Next: sp=Endoribonuclease Dicer homolog 3a; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Dicer-like protein 3.366e-07
Internal
sp_v3.0_unigene109949 SustainPine v3.0 379
• AutoFact: Early flowering 6 n=4 Tax=Arabidopsis RepID=Q6BDA0_ARATH 4.0e-16
• FL-Next: sp=Probable lysine-specific demethylase ELF6; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Jumonji domain protein 3.448e-07
N-terminus
sp_v3.0_unigene110041 SustainPine v3.0 473
• AutoFact: helicase , IBR and zinc finger protein domain-containing protein [Arabidopsis thaliana] gb|AED91533.1| helicase , IBR and zinc finger protein domain-containing protein [Arabidopsis thaliana] 7.0e-38
• FL-Next: sp=Putative uncharacterized protein At4g01020, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: ATP-dependent RNA helicase, putative 1.852e-21
Internal
sp_v3.0_unigene110467 SustainPine v3.0 647
• AutoFact: DUF659 domain containing protein 2.0e-19
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene110651 SustainPine v3.0 403
• AutoFact: DUF659 domain containing protein 1.0e-05
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene111038 SustainPine v3.0 252
• AutoFact: Dimer_Tnp_hAT domain containing protein 3.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: HAT family dimerisation domain containing protein 3.308e-08
Internal
sp_v3.0_unigene111469 SustainPine v3.0 241
• AutoFact: Aprataxin, putative n=1 Tax=Ricinus communis RepID=B9SWY0_RICCO 3.0e-15
• FL-Next: sp=Transcription factor bHLH140; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene111530 SustainPine v3.0 491
• AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9T7C4_RICCO 6.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Protein binding protein, putative 5.009e-08
Internal
sp_v3.0_unigene111672 SustainPine v3.0 146
• AutoFact: C2-H2 zinc finger protein [Arabidopsis thaliana] 3.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative transparent testa 1 2.532e-08
Internal
sp_v3.0_unigene111954 SustainPine v3.0 577
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein At3g23330 dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana] gb|AEE76753.1| pentatric 5.99756e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 2.58e-22
Internal
sp_v3.0_unigene112282 SustainPine v3.0 317
• AutoFact: ATP-dependent RNA helicase, putative n=3 Tax=Arabidopsis thaliana RepID=Q9C7G2_ARATH 8.99998e-41
• FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: ATP-dependent RNA helicase, putative 5.012e-24
Internal
sp_v3.0_unigene112707 SustainPine v3.0 215
• AutoFact: Unassigned protein
• FL-Next: sp=Lysine-specific demethylase REF6; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene112777 SustainPine v3.0 399
• AutoFact: Unassigned protein
• FL-Next: sp=Zinc finger protein ZAT3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene113453 SustainPine v3.0 453
• AutoFact: DUF659 domain containing protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain