Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, C2H2-like

Term: IPR015880  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene58804 SustainPine v3.0 388
AutoFact: Ubiquitin carboxyl-terminal hydrolase family protein [Arabidopsis thaliana] dbj|BAD42412.1| plant-specific family protein RPD1 [Arabidopsis thaliana] gb|AEE86235.1| Ubiquitin carboxyl-terminal hydrolase family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Internal
sp_v3.0_unigene59154 SustainPine v3.0 167
AutoFact: zinc finger protein 830 [Arabidopsis thaliana] gb|AAF26974.1|AC018363_19 unknown protein [Arabidopsis thaliana] dbj|BAF00979.1| hypothetical protein [Arabidopsis thaliana] gb|AEE73868.1| zinc finger protein 830 [Arabidopsis thaliana] 4.0e-14
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Chromosome chr9 scaffold_33, whole genome shotgun sequence 1.585e-06
Putative Complete
sp_v3.0_unigene59554 SustainPine v3.0 286
AutoFact: DUF659 domain containing protein 9.0e-26
FL-Next: tr=Putative uncharacterized protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Internal
sp_v3.0_unigene59574 SustainPine v3.0 275
AutoFact: DEA(D/H)-box RNA helicase family protein n=4 Tax=Arabidopsis RepID=F4HYJ6_ARATH 2.0e-40
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: ATP-dependent RNA helicase, putative 2.605e-13
Internal
sp_v3.0_unigene59903 SustainPine v3.0 305
AutoFact: RVT_2 domain containing protein 8.0e-29
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Putative uncharacterized protein 9.904e-14
Internal
sp_v3.0_unigene60153 SustainPine v3.0 318
AutoFact: DUF659 domain containing protein 1.0e-14
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Chromosome chr9 scaffold_90, whole genome shotgun sequence 5.125e-06
Internal
sp_v3.0_unigene60194 SustainPine v3.0 249
AutoFact: DUF1644 domain containing protein 2.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene60231 SustainPine v3.0 91
AutoFact: Cys2/His2 zinc-finger transcription factor n=1 Tax=Zea mays RepID=B6U9H2_MAIZE 7.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: PEThy 1.019e-08
Internal
sp_v3.0_unigene60275 SustainPine v3.0 374
AutoFact: Unassigned protein 2.0e-29
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Putative N-terminus
sp_v3.0_unigene60308 SustainPine v3.0 494
AutoFact: DUF659 domain containing protein 7.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene60400 SustainPine v3.0 428
AutoFact: Putative transposase n=1 Tax=Arabidopsis thaliana RepID=O81190_ARATH 3.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: HAT family dimerisation domain containing protein 2.017e-07
Internal
sp_v3.0_unigene60406 SustainPine v3.0 389
AutoFact: Embryonic flower 2 n=1 Tax=Acorus americanus RepID=A7Y7X9_ACOAM 1.0e-20
FL-Next: Isoform 2 of Polycomb group protein EMBRYONIC FLOWER 2 OS=Arabidopsis thaliana GN=EMF2 0.0
Sma3: Embryonic flower 2 5.946e-18
N-terminus
sp_v3.0_unigene61189 SustainPine v3.0 210
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Sma3: Chromosome chr9 scaffold_90, whole genome shotgun sequence 6.36e-06
Internal
sp_v3.0_unigene61240 SustainPine v3.0 317
AutoFact: DUF659 domain containing protein 3.0e-32
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene61405 SustainPine v3.0 208
AutoFact: Ubiquitin carboxyl-terminal hydrolase family protein n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7ME50_ARALL 4.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene61566 SustainPine v3.0 339
AutoFact: Abscisic acid receptor PYL4 n=2 Tax=Arabidopsis RepID=PYL4_ARATH 1.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Bet v I allergen-like 1.433e-07
Internal
sp_v3.0_unigene61612 SustainPine v3.0 263
AutoFact: DUF659 domain containing protein 6.0e-12
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene61659 SustainPine v3.0 315
AutoFact: Peptidase C78, ubiquitin fold modifier-specific peptidase 1/ 2 [Arabidopsis thaliana] dbj|BAB09650.1| unnamed protein product [Arabidopsis thaliana] gb|AAL38717.1| unknown protein [Arabidopsis thaliana] gb|AAM51374.1| unknown protein [Arabidopsis thaliana 7.0e-32
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
Putative N-terminus
sp_v3.0_unigene61909 SustainPine v3.0 310
AutoFact: DUF659 domain containing protein 2.0e-13
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Chromosome chr9 scaffold_90, whole genome shotgun sequence 3.703e-06
C-terminus
sp_v3.0_unigene61940 SustainPine v3.0 272
AutoFact: DUF659 domain containing protein 6.0e-30
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain