Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, C2H2-like

Term: IPR015880  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene50893 SustainPine v3.0 181
AutoFact: dicer-like protein [Oryza sativa Indica Group] 8.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dicer-like protein 4.387e-16
Internal
sp_v3.0_unigene51477 SustainPine v3.0 384
AutoFact: Dehydration-responsive element binding protein 3 n=1 Tax=Glycine max RepID=Q2VEU3_SOYBN 6.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AP2/ERF domain-containing transcription factor 4.626e-32
Putative N-terminus
sp_v3.0_unigene52192 SustainPine v3.0 469
AutoFact: DUF659 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene52199 SustainPine v3.0 413
AutoFact: DUF659 domain containing protein 1.0e-30
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene52346 SustainPine v3.0 348
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene52366 SustainPine v3.0 362
AutoFact: zinc finger, matrin type 5 [Danio rerio] 3.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene52385 SustainPine v3.0 359
AutoFact: Unassigned protein 2.0e-32
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Internal
sp_v3.0_unigene52504 SustainPine v3.0 238
AutoFact: putative pre-mRNA cleavage complex II protein Pcf11 [Oryza sativa Japonica Group] dbj|BAD46240.1| putative KIAA protein [Oryza sativa Japonica Group] 1.0e-20
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene52526 SustainPine v3.0 401
AutoFact: DUF659 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene52565 SustainPine v3.0 227
AutoFact: DUF659 domain containing protein 1.0e-11
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene52643 SustainPine v3.0 153
AutoFact: splicing factor 3A subunit 2 [Arabidopsis thaliana] gb|AAK96629.1| At2g32600/T26B15.16 [Arabidopsis thaliana] gb|AAC25942.2| putative spliceosome associated protein [Arabidopsis thaliana] gb|AAM19966.1| At2g32600/T26B15.16 [Arabidopsis thaliana] gb|AEC087 6.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Splicing factor 3A subunit 2 5.743e-09
Internal
sp_v3.0_unigene52894 SustainPine v3.0 271
AutoFact: DUF659 domain containing protein 2.0e-33
FL-Next: tr=Putative uncharacterized protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Internal
sp_v3.0_unigene53021 SustainPine v3.0 303
AutoFact: DUF659 domain containing protein 1.0e-39
FL-Next: tr=DNA binding protein, putative; Ricinus communis (Castor bean). 0.0
Sma3: Chromosome chr9 scaffold_90, whole genome shotgun sequence 7.136e-06
Internal
sp_v3.0_unigene53121 SustainPine v3.0 267
AutoFact: Unassigned protein 9.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene53265 SustainPine v3.0 219
AutoFact: ubiquitin fusion degradation UFD1 family protein [Arabidopsis thaliana] gb|AAL48228.1|AF446353_1 AT4g15420/dl3755w [Arabidopsis thaliana] gb|AAM63245.1| UFD1 like protein [Arabidopsis thaliana] gb|AAN28866.1| At4g15420/dl3755w [Arabidopsis thaliana] gb|AB 1.0e-05
FL-Next: tr=Uncharacterized protein; Brachypodium distachyon (Purple false brome) (Trachynia distachya). 0.0
Sma3: Putative PRLI-interacting factor K 4.545e-14
Internal
sp_v3.0_unigene53421 SustainPine v3.0 367
AutoFact: DUF659 domain containing protein 6.0e-16
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene53477 SustainPine v3.0 241
AutoFact: DUF659 domain containing protein 6.0e-21
FL-Next: tr=Putative uncharacterized protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Internal
sp_v3.0_unigene53608 SustainPine v3.0 340
AutoFact: DUF659 domain containing protein 2.0e-18
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene53714 SustainPine v3.0 434
AutoFact: Putative transposase n=1 Tax=Arabidopsis thaliana RepID=O81190_ARATH 1.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene53753 SustainPine v3.0 328
AutoFact: DUF659 domain containing protein 2.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain