Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: Zinc finger, C2H2-like

Term: IPR015880  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene45859 SustainPine v3.0 725
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: C2H2 zinc finger protein 1.988e-07
C-terminus
sp_v3.0_unigene46007 SustainPine v3.0 1837
AutoFact: Putative transposase n=1 Tax=Arabidopsis thaliana RepID=O81190_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene46185 SustainPine v3.0 1788
AutoFact: C2H2-like zinc finger protein [Arabidopsis thaliana] dbj|BAB11049.1| unnamed protein product [Arabidopsis thaliana] gb|AAK62647.1| AT5g52010/MSG15_9 [Arabidopsis thaliana] gb|AAM91075.1| AT5g52010/MSG15_9 [Arabidopsis thaliana] gb|AED96158.1| C2H2-like zi 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nucleic acid binding protein, putative 2.429e-08
Complete
sp_v3.0_unigene46214 SustainPine v3.0 591
AutoFact: ubiquitin-specific protease 23 [Arabidopsis thaliana] 1.0e-38
FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 23; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Ubiquitin carboxyl-terminal hydrolase 2.42e-19
Internal
sp_v3.0_unigene46340 SustainPine v3.0 417
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nucleic acid binding protein, putative 2.429e-08
Internal
sp_v3.0_unigene46755 SustainPine v3.0 209
AutoFact: DUF659 domain containing protein 1.0e-19
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Chromosome chr9 scaffold_90, whole genome shotgun sequence 6.637e-06
Putative C-terminus
sp_v3.0_unigene47110 SustainPine v3.0 149
AutoFact: Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Vitis vinifera RepID=A5B4K5_VITVI 2.0e-14
FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 23; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Ubiquitin carboxyl-terminal hydrolase 1.416e-16
Internal
sp_v3.0_unigene47309 SustainPine v3.0 196
AutoFact: RecName: Full=Zinc finger AN1 and C2H2 domain-containing stress-associated protein 16; Short=OsSAP16 dbj|BAC79697.1| putative arsenite inducible RNA associated protein [Oryza sativa Japonica Group] gb|EEC82292.1| hypothetical protein OsI_26540 [Oryza sati 2.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene48111 SustainPine v3.0 353
AutoFact: Myosin 2 n=6 Tax=Arabidopsis RepID=F4K0A6_ARATH 0.0
FL-Next: tr=Myosin 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Myosin 1.263e-24
Internal
sp_v3.0_unigene48154 SustainPine v3.0 613
AutoFact: DUF659 domain containing protein 2.0e-38
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene48155 SustainPine v3.0 741
AutoFact: zinc binding motif and SET domain-containing protein [Arabidopsis thaliana] gb|AEC07483.1| zinc binding motif and SET domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: sp=Histone-lysine N-methyltransferase SUVR5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene48219 SustainPine v3.0 230
AutoFact: Dimer_Tnp_hAT domain containing protein 9.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene48394 SustainPine v3.0 295
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene49220 SustainPine v3.0 334
AutoFact: Putative DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 8 (RNA helicase) n=2 Tax=Oryza sativa RepID=Q7XI36_ORYSJ 2.0e-20
FL-Next: sp=Putative uncharacterized protein At4g01020, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene49249 SustainPine v3.0 1048
AutoFact: relative of early flowering 6 protein [Arabidopsis thaliana] emb|CAB41155.1| putative zinc finger protein [Arabidopsis thaliana] gb|AAT77779.1| relative of early flowering 6 [Arabidopsis thaliana] gb|AEE78416.1| relative of early flowering 6 protein [Arab 0.0
FL-Next: sp=Lysine-specific demethylase REF6; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene49759 SustainPine v3.0 911
AutoFact: Nucleic acid binding protein, putative n=1 Tax=Ricinus communis RepID=B9R880_RICCO 5.99994e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene50051 SustainPine v3.0 290
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] emb|CAB71884.1| putative zinc-finger protein [Arabidopsis thaliana] gb|AAO29956.1| putative zinc-finger protein [Arabidopsis thaliana] gb|AAQ56798.1| At3g62240 [Arabidopsis thaliana] gb|AEE80326. 5.0e-20
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene50586 SustainPine v3.0 150
AutoFact: DUF659 domain containing protein 3.0e-19
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene50593 SustainPine v3.0 141
AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9S9D0_RICCO 2.0e-11
FL-Next: sp=Putative uncharacterized protein At4g01020, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene50784 SustainPine v3.0 146
AutoFact: myosin heavy chain class XI E3 protein, putative [Oryza sativa Japonica Group] 7.0e-13
FL-Next: tr=Putative uncharacterized protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Sma3: Myosin XI, putative 3.097e-16
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain