Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Translation elongation factor EFTu/EF1A, C-terminal

Term: IPR004160  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene79081 SustainPine v3.0 194
• AutoFact: translation elongation factor 1 alpha [Plantago major] 3.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
Misassembled
sp_v3.0_unigene79239 SustainPine v3.0 284
• AutoFact: translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92326.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92327.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menzi 3.0e-26
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 5.299e-36
Misassembled
sp_v3.0_unigene79862 SustainPine v3.0 187
• AutoFact: Elongation factor 1 alpha long form n=1 Tax=Salpingoeca sp. ATCC 50818 RepID=F2U1N5_9EUKA 4.0e-15
• FL-Next: sp=Elongation factor 1-alpha; Porphyra yezoensis. 0.0
• Sma3: EF-1 alpha-like protein (ISS) 3.164e-10
Internal
sp_v3.0_unigene79934 SustainPine v3.0 250
• AutoFact: translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92326.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92327.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menzi 2.0e-29
• FL-Next: sp=Elongation factor 1-alpha; Glycine max (Soybean) (Glycine hispida). 0.0
• Sma3: Elongation factor 1-alpha 0.0
Internal
sp_v3.0_unigene79939 SustainPine v3.0 121
• AutoFact: Elongation factor 1-alpha n=1 Tax=Seculamonas ecuadoriensis RepID=C1K9U6_9EUKA 3.0e-09
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 7.44e-17
Internal
sp_v3.0_unigene80177 SustainPine v3.0 194
• AutoFact: translation elongation factor-1 alpha [Picea abies] 3.0e-12
• FL-Next: sp=Elongation factor 1-alpha; Euglena gracilis. 0.0
• Sma3: Elongation factor 1-alpha 1.313e-33
Internal
sp_v3.0_unigene80231 SustainPine v3.0 208
• AutoFact: Translation elongation factor 1-alpha (Fragment) n=3 Tax=Hypocreales RepID=A4U9K0_9HYPO 5.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
Internal
sp_v3.0_unigene80901 SustainPine v3.0 197
• AutoFact: Elongation factor 1-alpha n=193 Tax=Eukaryota RepID=EF1A_ARATH 4.0e-11
• FL-Next: sp=Elongation factor 1-alpha 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Translation elongation factor-1 alpha 8.356e-07
Internal
sp_v3.0_unigene81043 SustainPine v3.0 93
• AutoFact: translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92326.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92327.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menzi 6.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene81351 SustainPine v3.0 194
• AutoFact: Elongation factor 1-alpha (Fragment) n=1 Tax=Spirogyra sp. FWAC125 RepID=A6MWT3_9VIRI 7.0e-23
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 3.39e-31
Internal
sp_v3.0_unigene81451 SustainPine v3.0 186
• AutoFact: Elongation factor-1 alpha (Fragment) n=11 Tax=Triaenonychidae RepID=D7RGG5_9ARAC 5.0e-27
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
Internal
sp_v3.0_unigene81513 SustainPine v3.0 148
• AutoFact: Elongation factor 1-alpha (Fragment) n=38 Tax=Microbotryaceae RepID=Q0MX41_9BASI 2.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 7.132e-31
Putative N-terminus
sp_v3.0_unigene94894 SustainPine v3.0 1766
• AutoFact: Elongation factor Tu n=4 Tax=Oryza sativa RepID=Q6ZI53_ORYSJ 0.0
• FL-Next: sp=Elongation factor Tu; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor Tu 0.0
C-terminus
sp_v3.0_unigene102674 SustainPine v3.0 377
• AutoFact: Elongation factor 1-alpha, putative (Fragment) n=1 Tax=Ricinus communis RepID=B9TK78_RICCO 0.0
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 4.42e-29
Internal
sp_v3.0_unigene105343 SustainPine v3.0 313
• AutoFact: translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92326.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92327.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menzi 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
Internal
sp_v3.0_unigene107919 SustainPine v3.0 225
• AutoFact: Putative elongation factor 1A (Fragment) n=1 Tax=Cupressus sempervirens RepID=B1PID4_9CONI 4.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
Putative C-terminus
sp_v3.0_unigene114600 SustainPine v3.0 143
• AutoFact: elongation factor-1 alpha [Musa acuminata] 1.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 6.401e-10
Putative C-terminus
sp_v3.0_unigene119540 SustainPine v3.0 461
• AutoFact: Elongation factor 1 alpha n=1 Tax=Ajellomyces capsulatus H143 RepID=C6HRH1_AJECH 6.0e-40
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
C-terminus
sp_v3.0_unigene121393 SustainPine v3.0 166
• AutoFact: Elongation factor 1-alpha, putative (Fragment) n=1 Tax=Ricinus communis RepID=B9TK78_RICCO 3.0e-17
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 4.636e-34
Internal
sp_v3.0_unigene124416 SustainPine v3.0 177
• AutoFact: translation elongation factor-1 alpha [Picea abies] 2.0e-14
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 2.929e-16
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain