Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Translation elongation factor EFTu/EF1A, C-terminal

Term: IPR004160  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene28113 SustainPine v3.0 922
AutoFact: Elongation factor 1 alpha long form n=1 Tax=Salpingoeca sp. ATCC 50818 RepID=F2U1N5_9EUKA 0.0
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Translation elongation factor-like protein 2.0459e-43
Putative C-terminus
sp_v3.0_unigene30059 SustainPine v3.0 1139
AutoFact: Eukaryotic peptide chain release factor GTP-binding subunit, putative n=1 Tax=Ricinus communis RepID=B9T2R0_RICCO 5.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene31046 SustainPine v3.0 778
AutoFact: Elongation factor 1 alpha long form n=2 Tax=Monosiga brevicollis RepID=Q95UT9_MONBE 0.0
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Translation elongation factor-like protein 7.338e-29
C-terminus
sp_v3.0_unigene31776 SustainPine v3.0 492
AutoFact: Elongation factor 1-alpha (Fragment) n=2 Tax=stramenopiles RepID=Q2TTF1_9STRA 0.0
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 0.0
Putative C-terminus
sp_v3.0_unigene31819 SustainPine v3.0 431
AutoFact: Elongation factor-1 alpha (Fragment) n=7 Tax=Faviina RepID=C5IV96_9CNID 8.00141e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 0.0
Putative Complete
sp_v3.0_unigene33348 SustainPine v3.0 1088
AutoFact: GTP-binding protein [Triticum aestivum] 3.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor Tu 6.663e-09
Putative N-terminus
sp_v3.0_unigene35718 SustainPine v3.0 685
AutoFact: Elongation factor Tu n=4 Tax=Oryza sativa RepID=Q6ZI53_ORYSJ 0.0
FL-Next: sp=Elongation factor Tu; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor Tu 0.0
C-terminus
sp_v3.0_unigene35754 SustainPine v3.0 510
AutoFact: Elongation factor 1-alpha (Fragment) n=19 Tax=Myxogastria RepID=D0PPE2_9MYCE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 0.0
C-terminus
sp_v3.0_unigene35800 SustainPine v3.0 551
AutoFact: Elongation factor 1-alpha n=2 Tax=Formicidae RepID=E2B5C8_9HYME 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 0.0
Putative Complete
sp_v3.0_unigene35877 SustainPine v3.0 579
AutoFact: Elongation factor 1-alpha (Fragment) n=2 Tax=stramenopiles RepID=Q2TTF1_9STRA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 0.0
C-terminus
sp_v3.0_unigene36476 SustainPine v3.0 684
AutoFact: DUF59 domain containing protein 1.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein FAM96B, putative 9.358e-09
Complete
sp_v3.0_unigene43752 SustainPine v3.0 397
AutoFact: Putative elongation factor 1-alpha (Fragment) n=1 Tax=Prunus dulcis RepID=A7Y7K1_PRUDU 2.0e-24
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 0.0
N-terminus
sp_v3.0_unigene45079 SustainPine v3.0 155
AutoFact: putative translation elongation factor 2EF1A / eIF-2-gamma [Arabidopsis thaliana] dbj|BAH19422.1| AT5G10630 [Arabidopsis thaliana] gb|AED91574.1| putative translation elongation factor 2EF1A / eIF-2-gamma [Arabidopsis thaliana] 2.0e-11
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene52085 SustainPine v3.0 157
AutoFact: Elongation factor 1-alpha n=193 Tax=Eukaryota RepID=EF1A_ARATH 4.0e-14
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 2.877e-24
Internal
sp_v3.0_unigene52463 SustainPine v3.0 432
AutoFact: Protein FAM96B, putative n=1 Tax=Ricinus communis RepID=B9SBL1_RICCO 2.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein FAM96B, putative 2.796e-09
C-terminus
sp_v3.0_unigene52657 SustainPine v3.0 182
AutoFact: translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92326.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92327.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menzi 3.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 0.0
Putative C-terminus
sp_v3.0_unigene53757 SustainPine v3.0 428
AutoFact: Elongation factor-1 alpha (Fragment) n=5 Tax=Eukaryota RepID=A9QA20_CATRO 9.0e-29
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 2.626e-31
N-terminus
sp_v3.0_unigene53922 SustainPine v3.0 124
AutoFact: Elongation factor 1-alpha n=4 Tax=Chara RepID=F1T1F1_9VIRI 3.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha, putative 1.821e-07
Putative N-terminus
sp_v3.0_unigene53936 SustainPine v3.0 190
AutoFact: elongation factor 1-alpha [Cucumis sativus] 3.0e-18
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 1.104e-38
Internal
sp_v3.0_unigene53980 SustainPine v3.0 387
AutoFact: translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92326.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92327.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menzi 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 0.0
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain