Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Translation elongation factor EFTu/EF1A, C-terminal

Term: IPR004160  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene186099 SustainPine v3.0 783
• AutoFact: Elongation factor 1 alpha long form n=2 Tax=Monosiga brevicollis RepID=Q95UT9_MONBE 0.0
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Translation elongation factor-like protein 0.0
C-terminus
sp_v3.0_unigene186107 SustainPine v3.0 488
• AutoFact: Elongation factor 1-alpha n=1 Tax=Solea senegalensis RepID=A6BMG3_SOLSE 4.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
C-terminus
sp_v3.0_unigene188027 SustainPine v3.0 424
• AutoFact: Putative elongation factor 1-alpha (Fragment) n=1 Tax=Prunus dulcis RepID=A7Y7K1_PRUDU 2.0e-24
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
N-terminus
sp_v3.0_unigene188397 SustainPine v3.0 378
• AutoFact: Elongation factor 1-alpha (Fragment) n=1 Tax=Acramoeba dendroida RepID=D0PPF3_9EUKA 0.0
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
Internal
sp_v3.0_unigene188490 SustainPine v3.0 491
• AutoFact: Elongation factor 1-alpha (Fragment) n=2 Tax=stramenopiles RepID=Q2TTF1_9STRA 0.0
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 8.709e-16
Internal
sp_v3.0_unigene188671 SustainPine v3.0 199
• AutoFact: elongation factor 1 alpha long form [Monosiga brevicollis] 2.0e-15
• FL-Next: tr=Eukaryotic translation elongation factor 1 alpha 2; Volvox carteri (Green alga). 0.0
• Sma3: EF-1 alpha-like protein 7.718e-12
C-terminus
sp_v3.0_unigene188736 SustainPine v3.0 406
• AutoFact: Elongation factor 1-alpha (Fragment) n=2 Tax=Eukaryota RepID=Q2TTF2_9EUKA 2.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
Putative C-terminus
sp_v3.0_unigene188845 SustainPine v3.0 719
• AutoFact: Elongation factor 1-alpha (Fragment) n=1 Tax=Acramoeba dendroida RepID=D0PPF3_9EUKA 0.0
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
C-terminus
sp_v3.0_unigene188859 SustainPine v3.0 461
• AutoFact: Elongation factor 1-alpha n=1 Tax=Malawimonas californiana RepID=C1K9U3_9EUKA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
Putative Complete
sp_v3.0_unigene190047 SustainPine v3.0 364
• AutoFact: Elongation factor Tu-2 n=1 Tax=Streptomyces ramocissimus RepID=EFTU2_STRRA 0.0
• FL-Next: sp=Elongation factor Tu; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor Tu 0.0
Putative C-terminus
sp_v3.0_unigene191568 SustainPine v3.0 417
• AutoFact: Elongation factor Tu, chloroplastic n=4 Tax=Chattonellaceae RepID=B2XTC8_HETA2 0.0
• FL-Next: sp=Elongation factor Tu; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor Tu 0.0
Internal
sp_v3.0_unigene203221 SustainPine v3.0 648
• AutoFact: Elongation factor 1-alpha n=7 Tax=Percomorpha RepID=Q8UW60_ORENI 0.0
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
C-terminus
sp_v3.0_unigene203639 SustainPine v3.0 508
• AutoFact: Elongation factor 1 alpha (Fragment) n=1 Tax=Cyclotella cryptica RepID=Q5EVA4_9STRA 0.0
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
Internal
sp_v3.0_unigene204453 SustainPine v3.0 579
• AutoFact: Elongation factor 1-alpha n=1 Tax=Trypanosoma brucei gambiense DAL972 RepID=D0A1M9_TRYB9 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
Putative Complete
sp_v3.0_unigene204685 SustainPine v3.0 456
• AutoFact: Elongation factor 1 alpha (Fragment) n=1 Tax=Cyclotella cryptica RepID=Q5EVA4_9STRA 0.0
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
Internal
sp_v3.0_unigene205454 SustainPine v3.0 449
• AutoFact: Elongation factor 1-alpha n=1 Tax=Brachionus plicatilis RepID=C6L868_BRAPC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
Putative C-terminus
sp_v3.0_unigene205570 SustainPine v3.0 438
• AutoFact: G1 to S phase transition protein n=3 Tax=Arabidopsis RepID=Q9LMS7_ARATH 1.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor Tu 4.891e-09
C-terminus
sp_v3.0_unigene205578 SustainPine v3.0 463
• AutoFact: Elongation factor 1 alpha (Fragment) n=1 Tax=Cyclotella cryptica RepID=Q5EVA4_9STRA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
C-terminus
sp_v3.0_unigene206069 SustainPine v3.0 341
• AutoFact: Elongation factor 1 alpha long form n=1 Tax=Salpingoeca sp. ATCC 50818 RepID=F2U1N5_9EUKA 9.0e-23
• FL-Next: tr=Translation elongation factor-like protein; Karlodinium micrum (Dinoflagellate). 0.0
• Sma3: Translation elongation factor-like protein 1.217e-14
C-terminus
sp_v3.0_unigene208494 SustainPine v3.0 1561
• AutoFact: Elongation factor 1-alpha n=193 Tax=Eukaryota RepID=EF1A_ARATH 0.0
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain