Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Translation elongation factor EFTu/EF1A, domain 2

Term: IPR004161  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene194 SustainPine v3.0 1781
AutoFact: Translation initiation factor IF-2 (Fragment) n=2 Tax=Vitis vinifera RepID=D7U9V2_VITVI 0.0
FL-Next: sp=Translation initiation factor IF-2, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Translation initiation factor IF-2 3.489e-35
Putative C-terminus
sp_v3.0_unigene466 SustainPine v3.0 2991
AutoFact: [J] COG5256 Translation elongation factor EF-1alpha (GTPase) 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene753 SustainPine v3.0 2228
AutoFact: Translation factor GUF1 homolog, mitochondrial n=2 Tax=Malpighiales RepID=GUF1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein-synthesizing GTPase 2.736e-12
Putative C-terminus
sp_v3.0_unigene836 SustainPine v3.0 2489
AutoFact: Elongation factor 1-alpha, putative n=1 Tax=Ricinus communis RepID=B9SPP6_RICCO 0.0
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1 alpha 3.665e-06
Complete
sp_v3.0_unigene1798 SustainPine v3.0 3535
AutoFact: U5 small nuclear ribonucleoprotein component [Arabidopsis thaliana] ref|NP_849600.1| U5 small nuclear ribonucleoprotein component [Arabidopsis thaliana] gb|AAF80219.1|AC025290_8 Contains similarity to an U5 snRNP-specific protein 116 kD from Homo sapiens 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene2576 SustainPine v3.0 3164
AutoFact: Translation elongation factor, putative n=1 Tax=Ricinus communis RepID=B9RPP6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene3223 SustainPine v3.0 3113
AutoFact: translation initiation factor [Pisum sativum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative translation initiation factor IF-2 3.803e-14
Complete
sp_v3.0_unigene4615 SustainPine v3.0 945
AutoFact: Elongation factor 1-alpha n=193 Tax=Eukaryota RepID=EF1A_ARATH 0.0
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 0.0
N-terminus
sp_v3.0_unigene5103 SustainPine v3.0 2010
AutoFact: translation initiation factor eIF-2 gamma subunit [Arabidopsis thaliana] gb|AAK29674.1|AF353097_1 protein synthesis initiation factor eIF2 gamma [Arabidopsis thaliana] gb|AAC16745.1| Strong similarity to initiation factor eIF-2, gb|U37354 from S. pombe. E 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene5507 SustainPine v3.0 3017
AutoFact: Translation elongation factor G, putative n=1 Tax=Ricinus communis RepID=B9RBP7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene5521 SustainPine v3.0 2737
AutoFact: GTP-binding protein TypA [Trifolium pratense] 0.0
FL-Next: sp=Translation factor GUF1 homolog, chloroplastic; Ostreococcus lucimarinus (strain CCE9901). 0.0
Sma3: GTP-binding protein typa/bipa, putative 1.738e-08
Complete
sp_v3.0_unigene5697 SustainPine v3.0 2054
AutoFact: Translation initiation factor IF-2 n=1 Tax=Ricinus communis RepID=B9T3K8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Translation initiation factor IF-2 4.281e-34
Complete
sp_v3.0_unigene5705 SustainPine v3.0 1655
AutoFact: putative LepA protein [Oryza sativa Japonica Group] dbj|BAD28168.1| putative LepA protein [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Translation factor GUF1 homolog, chloroplastic; Vitis vinifera (Grape). 0.0
Sma3: Chromosome chr7 scaffold_20, whole genome shotgun sequence 0.0
C-terminus
sp_v3.0_unigene6421 SustainPine v3.0 2319
AutoFact: Elongation factor Tu n=1 Tax=Ricinus communis RepID=B9SFP0_RICCO 0.0
FL-Next: sp=Elongation factor Tu; Ricinus communis (Castor bean). 0.0
Complete
sp_v3.0_unigene8000 SustainPine v3.0 740
AutoFact: flowering promoting factor 1 [Arabidopsis thaliana] emb|CAA72717.1| FPF1 protein [Arabidopsis thaliana] gb|ABE02402.1| At5g24860 [Arabidopsis thaliana] gb|AED93370.1| flowering promoting factor 1 [Arabidopsis thaliana] 8.0e-30
FL-Next: sp=Flowering-promoting factor 1; Sinapis alba (White mustard) (Brassica hirta). 0.0
Sma3: FPF1 protein 1.818e-09
Complete
sp_v3.0_unigene9638 SustainPine v3.0 1676
AutoFact: Mitochondrial elongation factor G [Oryza sativa Japonica Group] gb|EAZ27513.1| hypothetical protein OsJ_11462 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: mEF-G 4.14e-08
C-terminus
sp_v3.0_unigene11466 SustainPine v3.0 3148
AutoFact: Elongation factor 2 n=32 Tax=Magnoliophyta RepID=EF2_BETVU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Eukaryotic translation elongation factor, putative 0.0
Complete
sp_v3.0_unigene12256 SustainPine v3.0 1410
AutoFact: Bacterial peptide chain release factor 3 n=1 Tax=Lyngbya majuscula 3L RepID=F4XU14_9CYAN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene13346 SustainPine v3.0 552
AutoFact: peptide chain release factor 3 [Cyanothece sp. CCY0110] gb|EAZ90618.1| peptide chain release factor 3 [Cyanothece sp. CCY0110] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene15800 SustainPine v3.0 1991
AutoFact: Elongation factor Tu n=3 Tax=Spermatophyta RepID=A9NWL9_PICSI 0.0
FL-Next: sp=Elongation factor Tu; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor Tu 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain