Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Protein synthesis factor, GTP-binding

Term: IPR000795  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene54453 SustainPine v3.0 342
• AutoFact: translation elongation factor-1 alpha [Picea abies] 7.0e-24
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 1.891e-16
Putative C-terminus
sp_v3.0_unigene54711 SustainPine v3.0 135
• AutoFact: GFP binding protein [Brachypodium sylvaticum] 4.0e-10
• FL-Next: sp=Translation factor GUF1 homolog, mitochondrial; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Internal
sp_v3.0_unigene54953 SustainPine v3.0 318
• AutoFact: Elongation factor 1-alpha, putative (Fragment) n=1 Tax=Ricinus communis RepID=B9TK78_RICCO 6.02558e-44
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 4.849e-39
Internal
sp_v3.0_unigene55792 SustainPine v3.0 293
• AutoFact: Putative elongation factor 1-alpha (Fragment) n=1 Tax=Prunus dulcis RepID=A7Y7K1_PRUDU 8.0e-17
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
N-terminus
sp_v3.0_unigene56227 SustainPine v3.0 385
• AutoFact: putative translation elongation factor 2EF1A / eIF-2-gamma [Arabidopsis thaliana] dbj|BAH19422.1| AT5G10630 [Arabidopsis thaliana] gb|AED91574.1| putative translation elongation factor 2EF1A / eIF-2-gamma [Arabidopsis thaliana] 2.0e-17
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Putative C-terminus
sp_v3.0_unigene56338 SustainPine v3.0 157
• AutoFact: PREDICTED: U5 snRNP-specific protein, 116 kD n=1 Tax=Taeniopygia guttata RepID=UPI000194DBA9 2.0e-20
• FL-Next: tr=Putative uncharacterized protein; Aureococcus anophagefferens (Harmful bloom alga). 0.0
• Sma3: Elongation factor tu gtp-binding domain protein 2 6.505e-09
Internal
sp_v3.0_unigene57132 SustainPine v3.0 472
• AutoFact: translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92326.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92327.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menzi 4.00001e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 3.315e-18
N-terminus
sp_v3.0_unigene59229 SustainPine v3.0 245
• AutoFact: Elongation factor 1-alpha n=2 Tax=Enoplia RepID=E5S5Z6_TRISP 6.0e-11
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 3.929e-36
N-terminus
sp_v3.0_unigene59657 SustainPine v3.0 292
• AutoFact: Elongation factor EF-2 n=2 Tax=Arabidopsis RepID=F4J2T9_ARATH 4.0e-25
• FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Internal
sp_v3.0_unigene59713 SustainPine v3.0 194
• AutoFact: Elongation factor 4 n=71 Tax=Propionibacterium RepID=LEPA_PROAC 1.0e-27
• FL-Next: sp=Translation factor GUF1 homolog, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Protein-synthesizing GTPase 1.087e-12
Internal
sp_v3.0_unigene59722 SustainPine v3.0 153
• AutoFact: Elongation factor 1-alpha (Fragment) n=1 Tax=Rimicaris exoculata RepID=D7F1R6_RIMEX 6.0e-19
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 7.337e-32
Internal
sp_v3.0_unigene59946 SustainPine v3.0 99
• AutoFact: EF-1 alpha [Gymnadenia conopsea] 2.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 5.584e-08
Putative C-terminus
sp_v3.0_unigene60073 SustainPine v3.0 186
• AutoFact: Elongation factor 1-alpha, putative (Fragment) n=1 Tax=Ricinus communis RepID=B9TK78_RICCO 4.0e-13
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 8.572e-29
Internal
sp_v3.0_unigene60764 SustainPine v3.0 161
• AutoFact: Elongation factor 1-alpha n=1 Tax=Capsicum annuum RepID=Q9M516_CAPAN 4.0e-13
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 1.224e-36
Internal
sp_v3.0_unigene60766 SustainPine v3.0 129
• AutoFact: Elongation factor 1-alpha n=1 Tax=Capsicum annuum RepID=Q9M516_CAPAN 6.0e-11
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 4.146e-14
Internal
sp_v3.0_unigene60846 SustainPine v3.0 131
• AutoFact: Elongation factor 1-alpha (Fragment) n=1 Tax=Rimicaris exoculata RepID=D7F1R6_RIMEX 1.0e-10
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 2.148e-21
Internal
sp_v3.0_unigene61069 SustainPine v3.0 122
• AutoFact: Elongation factor-1 alpha (Fragment) n=5 Tax=Eukaryota RepID=A9QA20_CATRO 2.0e-09
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 1.406e-36
Internal
sp_v3.0_unigene61239 SustainPine v3.0 188
• AutoFact: Elongation factor-1 alpha (Fragment) n=5 Tax=Eukaryota RepID=A9QA20_CATRO 2.0e-23
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 1.282e-26
Internal
sp_v3.0_unigene61297 SustainPine v3.0 178
• AutoFact: Unassigned protein 3.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene61318 SustainPine v3.0 256
• AutoFact: Elongation factor 1 alpha (Fragment) n=1 Tax=Cynara cardunculus var. scolymus RepID=D2CP31_CYNSC 9.0e-17
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1.501e-07
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain