Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Protein synthesis factor, GTP-binding

Term: IPR000795  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene146243 SustainPine v3.0 288
• AutoFact: Elongation factor 1-alpha n=1 Tax=Capsicum annuum RepID=Q9M516_CAPAN 3.0e-30
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 2.509e-29
Misassembled
sp_v3.0_unigene146301 SustainPine v3.0 634
• AutoFact: Putative elongation factor 1A (Fragment) n=1 Tax=Cupressus sempervirens RepID=B1PID4_9CONI 2.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
Complete
sp_v3.0_unigene146401 SustainPine v3.0 575
• AutoFact: elongation factor 1 alpha [Saccharum hybrid cultivar CP65-357] 0.0
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Translation elongation factor-like protein 0.0
N-terminus
sp_v3.0_unigene148093 SustainPine v3.0 472
• AutoFact: Elongation factor Tu n=3 Tax=Pleosporineae RepID=B2W7S5_PYRTR 8.40779e-45
• FL-Next: sp=Elongation factor Tu; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor Tu 3.641e-21
C-terminus
sp_v3.0_unigene148500 SustainPine v3.0 98
• AutoFact: Translation elongation factor, putative n=1 Tax=Ricinus communis RepID=B9RPP6_RICCO 2.0e-07
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene150120 SustainPine v3.0 334
• AutoFact: Elongation factor G n=4 Tax=Leptospira RepID=EFG_LEPBJ 4.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: mEF-G 3.696e-08
Internal
sp_v3.0_unigene150320 SustainPine v3.0 218
• AutoFact: Elongation factor 1 alpha long form n=2 Tax=Monosiga brevicollis RepID=Q95UT9_MONBE 3.0e-14
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: EF-1 alpha-like protein 1.217e-15
Putative N-terminus
sp_v3.0_unigene150510 SustainPine v3.0 197
• AutoFact: Elongation factor 1-alpha (Fragment) n=2 Tax=Eukaryota RepID=Q2TTF2_9EUKA 1.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
Internal
sp_v3.0_unigene150568 SustainPine v3.0 530
• AutoFact: Elongation factor 1-alpha n=21 Tax=Branchiopoda RepID=EF1A_ARTSA 0.0
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
Putative N-terminus
sp_v3.0_unigene150649 SustainPine v3.0 372
• AutoFact: Elongation factor Tu n=1 Tax=alpha proteobacterium BAL199 RepID=A8TWG4_9PROT 0.0
• FL-Next: sp=Elongation factor Tu; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor Tu 0.0
Putative C-terminus
sp_v3.0_unigene150775 SustainPine v3.0 428
• AutoFact: Translation initiation factor IF-2 n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PHH2_CHIPD 3.00018e-42
• FL-Next: sp=Translation initiation factor IF-2, chloroplastic; Phaseolus vulgaris (Kidney bean) (French bean). 0.0
• Sma3: Translation initiation factor IF-2 1.986e-34
Internal
sp_v3.0_unigene150797 SustainPine v3.0 204
• AutoFact: Elongation factor Tu n=5 Tax=Flavobacteriales RepID=EFTU_FLAJ1 5.0e-18
• FL-Next: sp=Elongation factor Tu; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: EF-Tu 0.0
Internal
sp_v3.0_unigene150997 SustainPine v3.0 284
• AutoFact: Elongation factor 2 n=35 Tax=Hexapoda RepID=EF2_DROME 9.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 2 5.24086e-43
Putative C-terminus
sp_v3.0_unigene151096 SustainPine v3.0 450
• AutoFact: Elongation factor Tu 1 n=2 Tax=Taylorella equigenitalis MCE9 RepID=E8UFB1_TAYEM 6.0e-33
• FL-Next: sp=Elongation factor Tu; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor Tu 4.509e-40
C-terminus
sp_v3.0_unigene151409 SustainPine v3.0 299
• AutoFact: Elongation factor 2 (Fragment) n=1 Tax=Mastigamoeba balamuthi RepID=Q8T8C4_MASBA 4.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 2 2.447e-38
Internal
sp_v3.0_unigene151463 SustainPine v3.0 332
• AutoFact: PREDICTED: elongation factor 2 [Danio rerio] 6.0e-31
• FL-Next: sp=Elongation factor Tu; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 2 1.304e-33
Internal
sp_v3.0_unigene151540 SustainPine v3.0 219
• AutoFact: Elongation factor Tu n=4 Tax=Betaproteobacteria RepID=EFTU_AROAE 5.0e-33
• FL-Next: sp=Elongation factor Tu; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: EF-Tu 0.0
Putative C-terminus
sp_v3.0_unigene151890 SustainPine v3.0 273
• AutoFact: translation elongation factor G n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001744E75 1.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: mEF-G 3.678e-08
Internal
sp_v3.0_unigene151937 SustainPine v3.0 281
• AutoFact: 116 kDa U5 small nuclear ribonucleoprotein component n=3 Tax=Sordariaceae RepID=Q7SHP3_NEUCR 2.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor tu gtp-binding domain protein 2 6.505e-09
Putative C-terminus
sp_v3.0_unigene151991 SustainPine v3.0 224
• AutoFact: Putative elongation factor 2 (ISS) n=1 Tax=Ostreococcus tauri RepID=Q015X0_OSTTA 9.0e-10
• FL-Next: tr=Predicted protein; Ostreococcus lucimarinus (strain CCE9901). 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain