Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Ribosomal protein L4/L1e

Term: IPR002136  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene454 SustainPine v3.0 1808
AutoFact: 60S ribosomal protein L4 n=1 Tax=Prunus armeniaca RepID=RL4_PRUAR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene5698 SustainPine v3.0 1381
AutoFact: 50S ribosomal protein L4 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 50S ribosomal protein L4 9.565e-08
Complete
sp_v3.0_unigene8387 SustainPine v3.0 1314
AutoFact: RecName: Full=50S ribosomal protein L4, chloroplastic; Short=R-protein L4; Flags: Precursor pdb|3BBO|G Chain G, Homology Model For The Spinach Chloroplast 50s Subunit Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome emb|CAA75149.1| chloroplast ribosom 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene11795 SustainPine v3.0 1290
AutoFact: ENT domain containing protein 6.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Os03g0796400 protein 6.335e-06
Putative Complete
sp_v3.0_unigene16907 SustainPine v3.0 1820
AutoFact: 60S ribosomal protein L4 n=1 Tax=Prunus armeniaca RepID=RL4_PRUAR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene31502 SustainPine v3.0 585
AutoFact: 60S ribosomal protein L4, putative n=1 Tax=Ricinus communis RepID=B9SGS2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L4 1.433e-16
Internal
sp_v3.0_unigene55579 SustainPine v3.0 319
AutoFact: 60S ribosomal protein L4/L1/L2 n=1 Tax=Postia placenta Mad-698-R RepID=B8P757_POSPM 2.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L4 1.129e-16
Internal
sp_v3.0_unigene59751 SustainPine v3.0 177
AutoFact: Ribosomal protein L4/L1 family protein n=1 Tax=Oryza sativa Japonica Group RepID=Q2QQM8_ORYSJ 9.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 50S ribosomal protein L4 3.152e-08
C-terminus
sp_v3.0_unigene63219 SustainPine v3.0 247
AutoFact: PREDICTED: similar to ribosomal protein L4 n=1 Tax=Nasonia vitripennis RepID=UPI00015B409C 2.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L4 3.703e-12
Internal
sp_v3.0_unigene64501 SustainPine v3.0 210
AutoFact: 50S ribosomal protein L4, chloroplastic n=1 Tax=Nicotiana tabacum RepID=RK4_TOBAC 2.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: R-protein L4 2.785e-13
Internal
sp_v3.0_unigene68298 SustainPine v3.0 151
AutoFact: Ribosomal protein L4/L1 family protein n=1 Tax=Oryza sativa Japonica Group RepID=Q2QQM8_ORYSJ 4.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 50S ribosomal protein L4 3.818e-08
C-terminus
sp_v3.0_unigene68526 SustainPine v3.0 165
AutoFact: Ribosomal protein L4/L1 family protein n=1 Tax=Oryza sativa Japonica Group RepID=Q2QQM8_ORYSJ 6.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 50S ribosomal protein L4 3.818e-08
Putative C-terminus
sp_v3.0_unigene69896 SustainPine v3.0 154
AutoFact: Ribosomal protein L4/L1 family protein n=1 Tax=Oryza sativa Japonica Group RepID=Q2QQM8_ORYSJ 7.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 50S ribosomal protein L4 3.818e-08
C-terminus
sp_v3.0_unigene71264 SustainPine v3.0 387
AutoFact: Chain D, Localization Of The Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome pdb|3IZR|D Chain D, Localization Of The Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Tra 5.60519e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L4 5.474e-17
Putative C-terminus
sp_v3.0_unigene71492 SustainPine v3.0 135
AutoFact: Ribosomal protein L4/L1 family protein n=1 Tax=Oryza sativa Japonica Group RepID=Q2QQM8_ORYSJ 9.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene76819 SustainPine v3.0 326
AutoFact: Similar to 60S ribosomal protein L4 n=1 Tax=Leptosphaeria maculans RepID=E5AAJ6_LEPMC 1.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L4 1.382e-16
Internal
sp_v3.0_unigene78237 SustainPine v3.0 225
AutoFact: RecName: Full=60S ribosomal protein L4; AltName: Full=L1 gb|AAD32206.1|AF134732_1 60S ribosomal protein L1 [Prunus armeniaca] 7.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L4 1.358e-16
C-terminus
sp_v3.0_unigene100424 SustainPine v3.0 177
AutoFact: Ribosomal protein L4/L1 family protein n=1 Tax=Oryza sativa Japonica Group RepID=Q2QQM8_ORYSJ 4.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 50S ribosomal protein L4 3.818e-08
C-terminus
sp_v3.0_unigene127006 SustainPine v3.0 1157
AutoFact: 60S ribosomal protein L4, putative n=1 Tax=Ricinus communis RepID=B9SGS2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L4 2.221e-16
Putative Complete
sp_v3.0_unigene127151 SustainPine v3.0 1747
AutoFact: RecName: Full=60S ribosomal protein L4; AltName: Full=L1 gb|AAD32206.1|AF134732_1 60S ribosomal protein L1 [Prunus armeniaca] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain