Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Single-stranded nucleic acid binding R3H

Term: IPR001374  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene12418 SustainPine v3.0 3046
AutoFact: Potassium transporter, putative n=1 Tax=Ricinus communis RepID=B9RGU8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Potassium transporter, putative 5.60519e-44
Complete
sp_v3.0_unigene13576 SustainPine v3.0 380
AutoFact: putative helicase [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP-dependent RNA helicase, putative 4.47e-11
Internal
sp_v3.0_unigene13622 SustainPine v3.0 735
AutoFact: putative DNA-binding protein [Arabidopsis thaliana] gb|AAK76494.1| putative helicase [Arabidopsis thaliana] gb|AAM15033.1| putative helicase [Arabidopsis thaliana] gb|AAD17447.2| putative helicase [Arabidopsis thaliana] gb|AAM14300.1| putative helicase [A 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA-binding protein smubp-2, putative 5.237e-09
Internal
sp_v3.0_unigene14230 SustainPine v3.0 1209
AutoFact: Potassium transporter 17 n=2 Tax=Andropogoneae RepID=B6T8T1_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Potassium transporter, putative 2.01787e-43
C-terminus
sp_v3.0_unigene14658 SustainPine v3.0 1789
AutoFact: putative DNA-binding protein [Arabidopsis thaliana] gb|AED94034.1| putative DNA-binding protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA helicase-like 3.335e-09
C-terminus
sp_v3.0_unigene14859 SustainPine v3.0 1309
AutoFact: Potassium transporter, putative n=1 Tax=Ricinus communis RepID=B9RUB7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Potassium transporter, putative 3.50325e-44
N-terminus
sp_v3.0_unigene15591 SustainPine v3.0 662
AutoFact: NF-X1-type zinc finger protein NFXL1 [Arabidopsis thaliana] sp|Q9SY59.1|NFXL1_ARATH RecName: Full=NF-X1-type zinc finger protein NFXL1; Short=AtNFXL1 gb|AAD32867.1|AC005489_5 F14N23.5 [Arabidopsis thaliana] gb|AEE28549.1| NF-X1-type zinc finger protein NF 4.0e-39
FL-Next: sp=NF-X1-type zinc finger protein NFXL1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene15866 SustainPine v3.0 683
AutoFact: ATP-dependent RNA helicase, putative 4.0e-29
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: ATP-dependent RNA helicase, putative 5.366e-13
Putative N-terminus
sp_v3.0_unigene16687 SustainPine v3.0 221
AutoFact: putative stage III sporulation protein AA [Arabidopsis thaliana] dbj|BAF00902.1| hypothetical protein [Arabidopsis thaliana] gb|AEE31582.1| putative stage III sporulation protein AA [Arabidopsis thaliana] 1.0e-26
FL-Next: sp=Uncharacterized protein ycf45; Porphyra purpurea. Plastid; Chloroplast. 0.0
Sma3: Stage III sporulation protein AA, putative 2.673e-08
Internal
sp_v3.0_unigene19327 SustainPine v3.0 2209
AutoFact: high-affinity K+ transporter [Capsicum annuum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Potassium transporter, putative 0.0
Putative Complete
sp_v3.0_unigene19697 SustainPine v3.0 887
AutoFact: high-affinity K+ transporter [Capsicum annuum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Potassium transporter, putative 6.839e-36
Putative Complete
sp_v3.0_unigene22260 SustainPine v3.0 1135
AutoFact: RecName: Full=Putative potassium transporter 12; AltName: Full=OsHAK12 emb|CAD21002.1| putative potasium transporter [Oryza sativa Japonica Group] gb|EAZ41864.1| hypothetical protein OsJ_26409 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Potassium transporter, putative 2.45227e-43
C-terminus
sp_v3.0_unigene37593 SustainPine v3.0 971
AutoFact: putative potassium transporter [Cymodocea nodosa] 0.0
FL-Next: Isoform 2 of Probable potassium transporter 2 OS=Oryza sativa subsp. japonica GN=HAK2 0.0
Sma3: Potassium transporter, putative 2.46629e-43
Putative N-terminus
sp_v3.0_unigene37681 SustainPine v3.0 1056
AutoFact: HAK4 putative potassium transporter [Physcomitrella patens] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Potassium transporter, putative 1.03696e-43
N-terminus
sp_v3.0_unigene40936 SustainPine v3.0 620
AutoFact: Potassium transporter 11 [Arabidopsis thaliana] gb|AEC09058.1| Potassium transporter 11 [Arabidopsis thaliana] 0.0
FL-Next: Isoform 2 of Putative potassium transporter 12 OS=Oryza sativa subsp. japonica GN=HAK12 0.0
Sma3: Potassium transporter, putative 2.29813e-43
Internal
sp_v3.0_unigene41890 SustainPine v3.0 1283
AutoFact: RecName: Full=Putative potassium transporter 12; AltName: Full=OsHAK12 emb|CAD21002.1| putative potasium transporter [Oryza sativa Japonica Group] gb|EAZ41864.1| hypothetical protein OsJ_26409 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Potassium transporter, putative 2.34017e-43
Putative Complete
sp_v3.0_unigene41992 SustainPine v3.0 156
AutoFact: helicase associated domain-containing protein [Arabidopsis thaliana] gb|AEE33493.1| helicase associated domain-containing protein [Arabidopsis thaliana] 7.0e-19
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: ATP-dependent RNA helicase, putative 6.053e-16
Internal
sp_v3.0_unigene42983 SustainPine v3.0 1143
AutoFact: protein helicase in vascular tissue and tapetum [Arabidopsis thaliana] gb|AEC08442.1| protein helicase in vascular tissue and tapetum [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP-dependent RNA helicase, putative 1.995e-16
Putative N-terminus
sp_v3.0_unigene51749 SustainPine v3.0 409
AutoFact: putative potasium transporter [Oryza sativa Japonica Group] 1.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Potassium transporter, putative 7.952e-27
Internal
sp_v3.0_unigene54045 SustainPine v3.0 277
AutoFact: NF-X1-type zinc finger protein NFXL1 [Arabidopsis thaliana] sp|Q9SY59.1|NFXL1_ARATH RecName: Full=NF-X1-type zinc finger protein NFXL1; Short=AtNFXL1 gb|AAD32867.1|AC005489_5 F14N23.5 [Arabidopsis thaliana] gb|AEE28549.1| NF-X1-type zinc finger protein NF 1.0e-11
FL-Next: sp=NF-X1-type zinc finger protein NFXL1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain