Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Small GTP-binding protein domain

Term: IPR005225  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene156117 SustainPine v3.0 290
• AutoFact: Elongation factor G, domain IV family protein n=3 Tax=Tetrahymena RepID=Q22DR0_TETTH 3.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 2 4.17587e-43
Internal
sp_v3.0_unigene156206 SustainPine v3.0 304
• AutoFact: GTPase obg n=1 Tax=Flavobacterium johnsoniae UW101 RepID=OBG_FLAJ1 0.0
• FL-Next: tr=Spo0B-associated GTP-binding protein, putative; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene156240 SustainPine v3.0 574
• AutoFact: ADP-ribosylation factor family n=2 Tax=Oomycetes RepID=D0P1I0_PHYIT 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ADP-ribosylation factor 3 9.659e-12
C-terminus
sp_v3.0_unigene156283 SustainPine v3.0 523
• AutoFact: [R] COG1100 GTPase SAR1 and related small G proteins 2.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Rac gtpase, putative 6.805e-11
C-terminus
sp_v3.0_unigene156338 SustainPine v3.0 444
• AutoFact: PREDICTED: ras-related protein Rab-5C-like n=1 Tax=Acyrthosiphon pisum RepID=UPI0001791863 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Small GTP-binding protein 2.057e-11
N-terminus
sp_v3.0_unigene156349 SustainPine v3.0 350
• AutoFact: RAB4B, member RAS oncogene family [Mus musculus] 1.00053e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Small GTP-binding protein 4.915e-19
Putative N-terminus
sp_v3.0_unigene156365 SustainPine v3.0 224
• AutoFact: Rab GTPase n=1 Tax=Dictyostelium fasciculatum RepID=F4PYB3_9MYCE 1.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene156367 SustainPine v3.0 483
• AutoFact: ADP-ribosylation factor 1 n=67 Tax=Fungi/Metazoa group RepID=ARF1_HUMAN 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome 12 contig 1, DNA sequence 0.0
N-terminus
sp_v3.0_unigene156387 SustainPine v3.0 241
• AutoFact: GTP-binding protein TypA n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PK01_CHIPD 2.0e-34
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene156406 SustainPine v3.0 172
• AutoFact: ADP-ribosylation factor 1 [Oryza sativa Indica Group] 1.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ADP-ribosylation factor 5.292e-27
Internal
sp_v3.0_unigene156418 SustainPine v3.0 390
• AutoFact: PREDICTED: similar to ADP-ribosylation factor 1 n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000587A84 2.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ADP-ribosylation factor 6.064e-27
N-terminus
sp_v3.0_unigene156469 SustainPine v3.0 392
• AutoFact: PREDICTED: ras-related C3 botulinum toxin substrate 3-like n=1 Tax=Pongo abelii RepID=UPI0001D60C76 1.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene156482 SustainPine v3.0 560
• AutoFact: GTP-binding nuclear protein GSP1/Ran [Meyerozyma guilliermondii ATCC 6260] gb|EDK38181.1| GTP-binding nuclear protein GSP1/Ran [Meyerozyma guilliermondii ATCC 6260] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ras-related nuclear protein 3 6.824e-08
C-terminus
sp_v3.0_unigene156530 SustainPine v3.0 540
• AutoFact: ADP-ribosylation factor-like protein 8 n=2 Tax=Dictyostelium RepID=ARL8_DICDI 1.00053e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Arl8-family small GTPase 3.384e-13
Complete
sp_v3.0_unigene156568 SustainPine v3.0 255
• AutoFact: PREDICTED: similar to GTP-binding nuclear protein RAN/TC4 n=1 Tax=Hydra magnipapillata RepID=UPI0001924B32 7.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: GTP-binding nuclear protein RAN 3.9e-12
Internal
sp_v3.0_unigene156590 SustainPine v3.0 356
• AutoFact: GTP-binding protein yptV5, putative n=3 Tax=Entamoeba RepID=B0E7K0_ENTDI 3.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RAB7C 7.797e-06
C-terminus
sp_v3.0_unigene156665 SustainPine v3.0 122
• AutoFact: GTP-binding protein ypt5 [Aspergillus terreus NIH2624] gb|EAU34469.1| GTP-binding protein ypt5 [Aspergillus terreus NIH2624] 5.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Rab5/RabF-family small GTPase 2.812e-11
Internal
sp_v3.0_unigene156685 SustainPine v3.0 394
• AutoFact: ADP-ribosylation factor-like protein 8B [Homo sapiens] ref|NP_080287.1| ADP-ribosylation factor-like protein 8B [Mus musculus] ref|NP_001019503.1| ADP-ribosylation factor-like protein 8B [Rattus norvegicus] ref|NP_001156031.1| ADP-ribosylation factor-like 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Arl8-family small GTPase 4.227e-13
Putative N-terminus
sp_v3.0_unigene156722 SustainPine v3.0 261
• AutoFact: Elongation factor Tu (Fragment) n=1 Tax=Lautropia mirabilis ATCC 51599 RepID=E7S153_9BURK 1.0e-26
• FL-Next: sp=Elongation factor Tu; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor Tu 1.706e-22
C-terminus
sp_v3.0_unigene156737 SustainPine v3.0 527
• AutoFact: Ras-related small GTPase Rab5 n=1 Tax=Gymnochlora stellata RepID=B5A4M2_GYMST 3.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Rab5/RabF-family small GTPase 9.138e-12
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain