Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Small GTPase superfamily

Term: IPR001806  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene94669 SustainPine v3.0 338
• AutoFact: cullin 3B [Arabidopsis thaliana] sp|Q9C9L0.1|CUL3B_ARATH RecName: Full=Cullin-3B; Short=AtCUL3b gb|AAG52544.1|AC013289_11 putative cullin; 66460-68733 [Arabidopsis thaliana] gb|AEE34961.1| cullin 3B [Arabidopsis thaliana] 3.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene98922 SustainPine v3.0 476
• AutoFact: Protein phosphatase 2C-like [Medicago truncatula] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Protein phosphatase 2c, putative 5.662e-25
C-terminus
sp_v3.0_unigene112813 SustainPine v3.0 340
• AutoFact: putative tRNA modification GTPase trmE [Oryza sativa Japonica Group] 3.0e-37
• FL-Next: sp=Probable tRNA modification GTPase mnmE; Cyanidioschyzon merolae (Red alga). Plastid; Chloroplast. 0.0
Internal
sp_v3.0_unigene113271 SustainPine v3.0 620
• AutoFact: Rab family GTPase n=1 Tax=Selaginella moellendorffii RepID=D8RPN0_SELML 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Small GTP-binding protein 7.024e-22
N-terminus
sp_v3.0_unigene118698 SustainPine v3.0 358
• AutoFact: F28K19.23 n=2 Tax=Arabidopsis thaliana RepID=Q9SGZ9_ARATH 4.0e-31
• FL-Next: sp=Probable tRNA modification GTPase mnmE; Cyanidioschyzon merolae (Red alga). Plastid; Chloroplast. 0.0
Internal
sp_v3.0_unigene122407 SustainPine v3.0 1095
• AutoFact: Rab family GTPase n=3 Tax=Selaginella moellendorffii RepID=D8RE14_SELML 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene127258 SustainPine v3.0 582
• AutoFact: Ras-related protein ric1 (Fragment) n=2 Tax=Oryza sativa Indica Group RepID=A6N1N5_ORYSI 7.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Small GTP-binding protein 4.215e-11
C-terminus
sp_v3.0_unigene127356 SustainPine v3.0 558
• AutoFact: Rab family GTPase n=3 Tax=Selaginella moellendorffii RepID=D8RE14_SELML 4.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative GTP-binding protein 4.579e-08
C-terminus
sp_v3.0_unigene127471 SustainPine v3.0 1067
• AutoFact: PREDICTED: similar to Ras-related protein ORAB-1 n=1 Tax=Ciona intestinalis RepID=UPI0000523C85 1.0e-30
• FL-Next: tr=Rab1; Pinus pinaster (Maritime pine). 0.0
• Sma3: GTP-binding protein 7.73e-13
C-terminus
sp_v3.0_unigene127526 SustainPine v3.0 1700
• AutoFact: Rop4 small GTP binding protein n=8 Tax=Embryophyta RepID=Q9XF08_MAIZE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Small rho-1 GTP-binding protein 0.0
Complete
sp_v3.0_unigene127629 SustainPine v3.0 957
• AutoFact: Probable protein phosphatase 2C 52 n=2 Tax=Oryza sativa RepID=P2C52_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Protein phosphatase 2C 5.519e-35
C-terminus
sp_v3.0_unigene127713 SustainPine v3.0 679
• AutoFact: Ras-related protein Rab7 n=11 Tax=core eudicotyledons RepID=RAB7_SOYBN 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ras-related protein Rab7 3.247e-16
N-terminus
sp_v3.0_unigene127773 SustainPine v3.0 332
• AutoFact: putative small Ras GTP-binding protein [Arabidopsis thaliana] 5.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ras-related nuclear protein 3 4.19e-08
C-terminus
sp_v3.0_unigene128791 SustainPine v3.0 492
• AutoFact: Catalytic/ protein phosphatase type 2C/ protein serine/threonine phosphatase n=3 Tax=Andropogoneae RepID=B6TEB8_MAIZE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Catalytic/ protein phosphatase type 2C/ protein serine/threonine phosphatase 4.429e-11
Internal
sp_v3.0_unigene129631 SustainPine v3.0 280
• AutoFact: Rab family GTPase n=1 Tax=Selaginella moellendorffii RepID=D8R4N2_SELML 2.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene130002 SustainPine v3.0 492
• AutoFact: putative tRNA modification GTPase trmE [Oryza sativa Japonica Group] 0.0
• FL-Next: sp=Probable tRNA modification GTPase mnmE; Cyanidioschyzon merolae (Red alga). Plastid; Chloroplast. 0.0
Internal
sp_v3.0_unigene132552 SustainPine v3.0 348
• AutoFact: Rab family GTPase n=3 Tax=Selaginella moellendorffii RepID=D8RE14_SELML 8.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ras-related protein Rab11C 1.272e-12
Putative N-terminus
sp_v3.0_unigene133855 SustainPine v3.0 406
• AutoFact: Protein phosphtase 2C n=1 Tax=Marchantia polymorpha RepID=D3W6X9_MARPO 6.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Protein phosphatase 2C 2.8026e-45
Internal
sp_v3.0_unigene137685 SustainPine v3.0 382
• AutoFact: Ras-related protein Rab-18 n=4 Tax=Poaceae RepID=B6TCF9_MAIZE 3.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene141306 SustainPine v3.0 480
• AutoFact: small GTP-binding protein ROP1 [Vigna radiata] 6.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain