Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Small GTPase superfamily, Rab type

Term: IPR003579  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene154758 SustainPine v3.0 421
• AutoFact: PREDICTED: RAB1B, member RAS oncogene family-like n=1 Tax=Rattus norvegicus RepID=UPI0001CF4217 1.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Rab18/RabC-family small GTPase 2.97e-15
N-terminus
sp_v3.0_unigene154866 SustainPine v3.0 385
• AutoFact: PREDICTED: RAB1B, member RAS oncogene family-like n=1 Tax=Rattus norvegicus RepID=UPI0001CF4217 8.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: GTP-binding protein 2.592e-20
N-terminus
sp_v3.0_unigene155021 SustainPine v3.0 319
• AutoFact: Novel protein similar to H.sapiens RAB7A, RAB7A, member RAS oncogene family(RAB7A, zgc:91909) n=1 Tax=Danio rerio RepID=Q6GQM5_DANRE 1.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ras-related protein Rab7 9.733e-13
N-terminus
sp_v3.0_unigene155431 SustainPine v3.0 281
• AutoFact: Ras-related protein ric1 (Fragment) n=2 Tax=Oryza sativa Indica Group RepID=A6N1N5_ORYSI 1.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Small GTP-binding protein 1.623e-08
Putative C-terminus
sp_v3.0_unigene155546 SustainPine v3.0 414
• AutoFact: Ras-related protein Rab-1A n=4 Tax=Eumetazoa RepID=RAB1A_LYMST 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: GTP-binding protein 4.921e-18
N-terminus
sp_v3.0_unigene155771 SustainPine v3.0 558
• AutoFact: GTP-binding protein ypt1 n=3 Tax=leotiomyceta RepID=YPT1_NEUCR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: YptC1 0.0
N-terminus
sp_v3.0_unigene155883 SustainPine v3.0 392
• AutoFact: GTP-binding protein o-rab1 n=1 Tax=Trichoplax adhaerens RepID=B3RKM7_TRIAD 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: GTP-binding protein 3.585e-13
N-terminus
sp_v3.0_unigene155926 SustainPine v3.0 504
• AutoFact: Rab1-like small GTP-binding protein [Petunia x hybrida] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Small GTP-binding protein 1.501e-19
C-terminus
sp_v3.0_unigene156110 SustainPine v3.0 235
• AutoFact: RAB GTPase-like protein C2B [Arabidopsis thaliana] ref|NP_001189850.1| RAB GTPase-like protein C2B [Arabidopsis thaliana] ref|NP_001189851.1| RAB GTPase-like protein C2B [Arabidopsis thaliana] sp|Q9SF92.1|RAC2B_ARATH RecName: Full=Ras-related protein RABC 9.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Rab18/RabC-family small GTPase 2.68e-20
Internal
sp_v3.0_unigene156111 SustainPine v3.0 365
• AutoFact: Ras-like GTP-binding protein YPT1 n=2 Tax=Phytophthora infestans RepID=YPT1_PHYIN 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: GTP-binding protein 1.963e-18
Internal
sp_v3.0_unigene156338 SustainPine v3.0 444
• AutoFact: PREDICTED: ras-related protein Rab-5C-like n=1 Tax=Acyrthosiphon pisum RepID=UPI0001791863 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Small GTP-binding protein 2.057e-11
N-terminus
sp_v3.0_unigene156349 SustainPine v3.0 350
• AutoFact: RAB4B, member RAS oncogene family [Mus musculus] 1.00053e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Small GTP-binding protein 4.915e-19
Putative N-terminus
sp_v3.0_unigene156365 SustainPine v3.0 224
• AutoFact: Rab GTPase n=1 Tax=Dictyostelium fasciculatum RepID=F4PYB3_9MYCE 1.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene156590 SustainPine v3.0 356
• AutoFact: GTP-binding protein yptV5, putative n=3 Tax=Entamoeba RepID=B0E7K0_ENTDI 3.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RAB7C 7.797e-06
C-terminus
sp_v3.0_unigene156665 SustainPine v3.0 122
• AutoFact: GTP-binding protein ypt5 [Aspergillus terreus NIH2624] gb|EAU34469.1| GTP-binding protein ypt5 [Aspergillus terreus NIH2624] 5.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Rab5/RabF-family small GTPase 2.812e-11
Internal
sp_v3.0_unigene156737 SustainPine v3.0 527
• AutoFact: Ras-related small GTPase Rab5 n=1 Tax=Gymnochlora stellata RepID=B5A4M2_GYMST 3.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Rab5/RabF-family small GTPase 9.138e-12
C-terminus
sp_v3.0_unigene156894 SustainPine v3.0 165
• AutoFact: ras-related protein Rab-21 [Danio rerio] gb|AAI24523.1| Zgc:154045 [Danio rerio] gb|AAI65035.1| Zgc:154045 protein [Danio rerio] 5.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Rab21-family small GTPase 2.032e-14
Internal
sp_v3.0_unigene156963 SustainPine v3.0 424
• AutoFact: Rab11, putative n=2 Tax=Entamoeba RepID=B0EC58_ENTDI 5.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: GTP-binding protein 6.884e-25
N-terminus
sp_v3.0_unigene157139 SustainPine v3.0 437
• AutoFact: GTP-binding protein ypt1 n=3 Tax=Agaricales RepID=A8NFW9_COPC7 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: GTP-binding protein 2.462e-15
Putative N-terminus
sp_v3.0_unigene157150 SustainPine v3.0 485
• AutoFact: PREDICTED: ras-related protein Rab-2A-like n=1 Tax=Acyrthosiphon pisum RepID=UPI0001791EF1 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: GTP-binding protein 1.472e-17
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain