Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Small GTPase superfamily, Rab type

Term: IPR003579  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene152289 SustainPine v3.0 503
• AutoFact: Zgc:100918 n=6 Tax=Clupeocephala RepID=Q641M4_DANRE 5.00264e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ras-related protein Rab7 1.056e-23
C-terminus
sp_v3.0_unigene152439 SustainPine v3.0 424
• AutoFact: PREDICTED: ras-related protein Rab-11A-like n=1 Tax=Anolis carolinensis RepID=UPI000203AE00 2.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ras-related protein Rab11C 4.552e-15
Putative C-terminus
sp_v3.0_unigene152720 SustainPine v3.0 302
• AutoFact: GTP-binding protein yptV1 n=2 Tax=Pucciniales RepID=E3K628_PUCGT 2.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene152890 SustainPine v3.0 469
• AutoFact: GTP-binding protein o-rab1 n=1 Tax=Trichoplax adhaerens RepID=B3RKM7_TRIAD 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Small GTP-binding protein 3.66e-20
C-terminus
sp_v3.0_unigene152936 SustainPine v3.0 390
• AutoFact: Rab GTPase n=2 Tax=Dictyosteliida RepID=D3BBG2_POLPA 6.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Rab5/RabF-family small GTPase 7.78e-09
C-terminus
sp_v3.0_unigene152987 SustainPine v3.0 334
• AutoFact: GTP-binding protein n=2 Tax=Pichia angusta RepID=E7R1T2_PICAD 2.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ypt1-like rab-type small G protein 4.386e-06
N-terminus
sp_v3.0_unigene153081 SustainPine v3.0 461
• AutoFact: Rab GTPase n=1 Tax=Polysphondylium pallidum RepID=D3AWN3_POLPA 3.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: GTP-binding protein 1.18e-17
Putative C-terminus
sp_v3.0_unigene153093 SustainPine v3.0 329
• AutoFact: GTP-binding protein YPTC5 n=4 Tax=Chlamydomonadales RepID=YPTC5_CHLRE 5.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ras-related protein Rab7 7.057e-13
N-terminus
sp_v3.0_unigene153205 SustainPine v3.0 199
• AutoFact: Ras-related protein Rab-14 n=2 Tax=Dictyostelium RepID=RAB14_DICDI 6.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Small GTP-binding protein 6.084e-09
N-terminus
sp_v3.0_unigene153452 SustainPine v3.0 486
• AutoFact: Rab small monomeric GTPase n=1 Tax=Grosmannia clavigera kw1407 RepID=F0X981_GROCL 4.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ras-related protein Rab7 9.151e-24
C-terminus
sp_v3.0_unigene153672 SustainPine v3.0 457
• AutoFact: Rab11A, RAB family GTPase n=1 Tax=Dictyostelium purpureum RepID=F0ZAM9_DICPU 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: GTP-binding protein 3.159e-17
N-terminus
sp_v3.0_unigene153905 SustainPine v3.0 417
• AutoFact: Rab GTPase [Dictyostelium discoideum AX4] sp|P36410.2|RAB14_DICDI RecName: Full=Ras-related protein Rab-14; AltName: Full=Rab4-like GTPase gb|EAL66754.1| Rab GTPase [Dictyostelium discoideum AX4] 4.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RAB2 homolog 9.747e-06
C-terminus
sp_v3.0_unigene154252 SustainPine v3.0 408
• AutoFact: Rab-family small GTPase Rab1A n=1 Tax=Tetrahymena thermophila RepID=E1CAY1_TETTH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: GTP-binding protein 1.905e-20
Putative N-terminus
sp_v3.0_unigene154309 SustainPine v3.0 397
• AutoFact: Ras-related protein Rab-7A n=3 Tax=Dictyosteliida RepID=RAB7A_DICDI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ras-related protein Rab7 4.884e-16
N-terminus
sp_v3.0_unigene154460 SustainPine v3.0 188
• AutoFact: GTP-binding protein YPTC5 n=4 Tax=Chlamydomonadales RepID=YPTC5_CHLRE 9.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ras-related protein Rab7 1.586e-19
Internal
sp_v3.0_unigene154509 SustainPine v3.0 429
• AutoFact: Small GTPase, putative n=3 Tax=Trypanosoma brucei RepID=Q38DS4_9TRYP 5.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ras-related protein Rab7 2.73e-10
Internal
sp_v3.0_unigene154674 SustainPine v3.0 410
• AutoFact: Small GTP-binding protein Rab4 n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9C4Y4_9EUKA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Rab11/RabA-family small GTPase 2.048e-11
Internal
sp_v3.0_unigene154678 SustainPine v3.0 483
• AutoFact: Rab-family small GTPase Rab1C n=1 Tax=Tetrahymena thermophila RepID=E1CAY3_TETTH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: GTP-binding protein 4.266e-18
Putative N-terminus
sp_v3.0_unigene154703 SustainPine v3.0 494
• AutoFact: Ras-like protein 1 n=1 Tax=Physarum polycephalum RepID=RAS1_PHYPO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene154728 SustainPine v3.0 357
• AutoFact: PREDICTED: similar to RAB22A, member RAS oncogene family [Strongylocentrotus purpuratus] ref|XP_001176279.1| PREDICTED: similar to RAB22A, member RAS oncogene family [Strongylocentrotus purpuratus] 2.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ras-related protein Rab11A 4.977e-15
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain