Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Small GTPase superfamily, Rab type

Term: IPR003579  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene128791 SustainPine v3.0 492
• AutoFact: Catalytic/ protein phosphatase type 2C/ protein serine/threonine phosphatase n=3 Tax=Andropogoneae RepID=B6TEB8_MAIZE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Catalytic/ protein phosphatase type 2C/ protein serine/threonine phosphatase 4.429e-11
Internal
sp_v3.0_unigene129631 SustainPine v3.0 280
• AutoFact: Rab family GTPase n=1 Tax=Selaginella moellendorffii RepID=D8R4N2_SELML 2.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene132552 SustainPine v3.0 348
• AutoFact: Rab family GTPase n=3 Tax=Selaginella moellendorffii RepID=D8RE14_SELML 8.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ras-related protein Rab11C 1.272e-12
Putative N-terminus
sp_v3.0_unigene133855 SustainPine v3.0 406
• AutoFact: Protein phosphtase 2C n=1 Tax=Marchantia polymorpha RepID=D3W6X9_MARPO 6.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Protein phosphatase 2C 2.8026e-45
Internal
sp_v3.0_unigene137685 SustainPine v3.0 382
• AutoFact: Ras-related protein Rab-18 n=4 Tax=Poaceae RepID=B6TCF9_MAIZE 3.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene141342 SustainPine v3.0 360
• AutoFact: small GTP-binding protein [Glycine max] 8.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: GTP-binding protein 1.809e-15
Internal
sp_v3.0_unigene144260 SustainPine v3.0 550
• AutoFact: Rab family GTPase n=3 Tax=Selaginella moellendorffii RepID=D8RE14_SELML 6.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: GTP-binding protein 2.902e-14
Misassembled
sp_v3.0_unigene144611 SustainPine v3.0 497
• AutoFact: protein phosphatase 2C [Medicago sativa] 9.99967e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Protein phosphatase 2c, putative 6.561e-21
Internal
sp_v3.0_unigene148487 SustainPine v3.0 402
• AutoFact: Ras-related protein RABG3b n=2 Tax=Arabidopsis RepID=RAG3B_ARATH 8.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ras-related protein Rab7 7.91e-20
N-terminus
sp_v3.0_unigene150495 SustainPine v3.0 336
• AutoFact: GTP-binding protein ypt7 n=7 Tax=Onygenales RepID=C1GEC2_PARBD 6.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene150554 SustainPine v3.0 472
• AutoFact: Ras-related protein Rab-8B n=1 Tax=Dictyostelium discoideum RepID=RAB8B_DICDI 6.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene150565 SustainPine v3.0 436
• AutoFact: Ras-related protein Rab-11B n=2 Tax=Lepeophtheirus salmonis RepID=C1BSD1_9MAXI 9.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ras-related protein Rab11C 7.732e-10
C-terminus
sp_v3.0_unigene150675 SustainPine v3.0 224
• AutoFact: Ras-related protein Rab-5C n=1 Tax=Caligus clemensi RepID=C1C0G6_9MAXI 2.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Rab5/RabF-family small GTPase 1.951e-08
Internal
sp_v3.0_unigene150788 SustainPine v3.0 298
• AutoFact: Ras-related protein RIC1 n=7 Tax=commelinids RepID=RIC1_ORYSJ 2.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Small GTP-binding protein 2.582e-08
Internal
sp_v3.0_unigene150919 SustainPine v3.0 155
• AutoFact: Ras-like GTP-binding protein, putative n=2 Tax=Aspergillus RepID=B8NQY9_ASPFN 3.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Rab8/RabE-family small GTPase 2.087e-10
Internal
sp_v3.0_unigene151489 SustainPine v3.0 298
• AutoFact: Rab GTPase n=2 Tax=Dictyosteliida RepID=D3BBG2_POLPA 2.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Rab5/RabF-family small GTPase 5.136e-08
C-terminus
sp_v3.0_unigene151584 SustainPine v3.0 460
• AutoFact: Rab family small GTPase n=1 Tax=Naegleria gruberi RepID=D2VPN7_NAEGR 3.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ethylene-responsive small GTP-binding protein 1.864e-07
C-terminus
sp_v3.0_unigene151668 SustainPine v3.0 242
• AutoFact: GTP-binding protein RAB5 n=2 Tax=Agaricales RepID=A6ZIF4_LENED 5.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Plant-unique Rab5 homolog 2.852e-12
Internal
sp_v3.0_unigene151714 SustainPine v3.0 465
• AutoFact: Ras-related protein Rab11D n=5 Tax=Andropogoneae RepID=B4FJB2_MAIZE 9.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ras-related protein Rab11C 2.347e-15
Putative C-terminus
sp_v3.0_unigene152048 SustainPine v3.0 381
• AutoFact: Rab7 protein n=1 Tax=Trichoplax adhaerens RepID=B3RID8_TRIAD 1.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ras-related protein Rab7 3.381e-18
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain