Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Small GTPase superfamily, Rab type

Term: IPR003579  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene35676 SustainPine v3.0 915
AutoFact: Rab family GTPase n=3 Tax=Selaginella moellendorffii RepID=D8RE14_SELML 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: GTP-binding protein 3.112e-17
N-terminus
sp_v3.0_unigene37934 SustainPine v3.0 996
AutoFact: Ras-related protein Rab-18 [Arabidopsis thaliana] ref|NP_001077675.1| Ras-related protein Rab-18 [Arabidopsis thaliana] ref|NP_001117435.1| Ras-related protein Rab-18 [Arabidopsis thaliana] sp|O23657.1|RABC1_ARATH RecName: Full=Ras-related protein RABC1; 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: GTP-binding protein 4.763e-20
Complete
sp_v3.0_unigene45940 SustainPine v3.0 1130
AutoFact: Rab family GTPase n=3 Tax=Selaginella moellendorffii RepID=D8RE14_SELML 9.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: GTP-binding protein 1.691e-17
Putative Complete
sp_v3.0_unigene51588 SustainPine v3.0 551
AutoFact: putative protein phosphatase 2C 76 [Arabidopsis thaliana] sp|Q94AT1.1|P2C76_ARATH RecName: Full=Probable protein phosphatase 2C 76; Short=AtPP2C76 gb|AAK76493.1| putative protein phosphatase 2C [Arabidopsis thaliana] gb|AAM14299.1| putative phosphatase 2C 7.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Catalytic/ protein phosphatase type 2C/ protein serine/threonine phosphatase 4.021e-11
Internal
sp_v3.0_unigene51644 SustainPine v3.0 712
AutoFact: Rab2 family GTPase putative n=1 Tax=Albugo laibachii Nc14 RepID=F0W4W8_9STRA 6.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Small GTP-binding protein 7.988e-09
Putative Complete
sp_v3.0_unigene52027 SustainPine v3.0 326
AutoFact: RAB GTPase H1E [Arabidopsis thaliana] sp|Q9LFT9.1|RAH1E_ARATH RecName: Full=Ras-related protein RABH1e; Short=AtRABH1e emb|CAB96682.1| GTP-binding protein [Arabidopsis thaliana] gb|AED91514.1| RAB GTPase H1E [Arabidopsis thaliana] 2.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Rab6/RabH-family small GTPase 7.24e-11
Internal
sp_v3.0_unigene53106 SustainPine v3.0 417
AutoFact: Mgp2 GTP-binding protein n=1 Tax=Zea mays RepID=Q41831_MAIZE 1.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ras-related protein Rab11A 1.795e-09
Putative N-terminus
sp_v3.0_unigene53238 SustainPine v3.0 164
AutoFact: Putative Ras-related protein Rab-1C n=2 Tax=Theria RepID=RAB1C_HUMAN 4.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Small GTP-binding protein 2.309e-11
Internal
sp_v3.0_unigene53450 SustainPine v3.0 428
AutoFact: Rab family GTPase n=2 Tax=Selaginella moellendorffii RepID=D8QUM7_SELML 1.99965e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Rab21-family small GTPase 1.024e-13
Internal
sp_v3.0_unigene58226 SustainPine v3.0 151
AutoFact: 60S ribosomal protein L5, mitochondrial n=6 Tax=Solanaceae RepID=RM05_SOLTU 1.0e-05
FL-Next: sp=60S ribosomal protein L5, mitochondrial; Solanum tuberosum (Potato). Mitochondrion. 0.0
Sma3: Mitochondrial ribosomal protein L5 2.8026e-45
Putative C-terminus
sp_v3.0_unigene58326 SustainPine v3.0 345
AutoFact: small GTP-binding protein [Mesembryanthemum crystallinum] 6.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ras-related protein RHN1 1.309e-12
C-terminus
sp_v3.0_unigene58482 SustainPine v3.0 203
AutoFact: Ras-related protein RABA2a [Arabidopsis thaliana] sp|O04486.1|RAA2A_ARATH RecName: Full=Ras-related protein RABA2a; Short=AtRABA2a; AltName: Full=Ras-related protein Rab11C; Short=AtRab11C; Flags: Precursor gb|AAB60720.1| Strong similarity to A. thaliana 2.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ras-related protein Rab11C 1.43e-12
Putative N-terminus
sp_v3.0_unigene60647 SustainPine v3.0 366
AutoFact: Rab family GTPase n=3 Tax=Selaginella moellendorffii RepID=D8RE14_SELML 2.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative GTP-binding protein 1.642e-10
N-terminus
sp_v3.0_unigene61380 SustainPine v3.0 318
AutoFact: Rab11/RabA-family small GTPase n=2 Tax=Physcomitrella patens subsp. patens RepID=A9T2W4_PHYPA 2.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Rab11/RabA-family small GTPase 1.244e-13
N-terminus
sp_v3.0_unigene61983 SustainPine v3.0 262
AutoFact: Ras-related gtp-binding protein n=2 Tax=Micromonas RepID=C1E029_MICSR 2.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: GTP-binding protein 1.143e-12
Internal
sp_v3.0_unigene64318 SustainPine v3.0 121
AutoFact: PREDICTED: similar to guanine nucleotide regulatory protein n=1 Tax=Vitis vinifera RepID=UPI0001985FCE 6.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene65269 SustainPine v3.0 262
AutoFact: Ras-related protein RIC1 n=7 Tax=commelinids RepID=RIC1_ORYSJ 7.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Small GTP-binding protein 3.243e-13
Internal
sp_v3.0_unigene65459 SustainPine v3.0 216
AutoFact: Rab5/RabF-family small GTPase n=2 Tax=Physcomitrella patens subsp. patens RepID=A9STK1_PHYPA 1.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ras-related protein RHN1 7.655e-14
Internal
sp_v3.0_unigene65669 SustainPine v3.0 210
AutoFact: Ras-related protein RABA4a n=2 Tax=Arabidopsis RepID=RAA4A_ARATH 2.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene65670 SustainPine v3.0 172
AutoFact: Rab family GTPase n=3 Tax=Selaginella moellendorffii RepID=D8RE14_SELML 2.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: GTP-binding protein 5.445e-06
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain