Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Small GTPase superfamily, Rab type

Term: IPR003579  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene191709 SustainPine v3.0 555
• AutoFact: Ras-like protein 1 n=1 Tax=Physarum polycephalum RepID=RAS1_PHYPO 8.99634e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ras-related protein ARA-3 1.867e-07
Putative C-terminus
sp_v3.0_unigene192140 SustainPine v3.0 242
• AutoFact: Rab11b protein n=1 Tax=Xenopus laevis RepID=Q66KS9_XENLA 4.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: GTP-binding protein 1.877e-17
N-terminus
sp_v3.0_unigene192156 SustainPine v3.0 582
• AutoFact: Rab7, RAB family GTPase n=1 Tax=Ectocarpus siliculosus RepID=D8LM42_ECTSI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ras-related protein Rab7 1.281e-23
C-terminus
sp_v3.0_unigene192323 SustainPine v3.0 471
• AutoFact: Ras-related protein Rab-7A n=3 Tax=Dictyosteliida RepID=RAB7A_DICDI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ras-related protein Rab7 1.295e-23
C-terminus
sp_v3.0_unigene193129 SustainPine v3.0 398
• AutoFact: RAB GTPase H1E [Arabidopsis thaliana] sp|Q9LFT9.1|RAH1E_ARATH RecName: Full=Ras-related protein RABH1e; Short=AtRABH1e emb|CAB96682.1| GTP-binding protein [Arabidopsis thaliana] gb|AED91514.1| RAB GTPase H1E [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Rab6/RabH-family small GTPase 5.22e-10
Internal
sp_v3.0_unigene193457 SustainPine v3.0 842
• AutoFact: ras-related protein Rab-18-like n=1 Tax=Saccoglossus kowalevskii RepID=UPI0001D3A15E 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Rab18/RabC-family small GTPase 3.776e-19
Complete
sp_v3.0_unigene193608 SustainPine v3.0 433
• AutoFact: Ras-related protein Rab-5 n=2 Tax=Babesia bovis RepID=A7AVR2_BABBO 5.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ras-related protein RHN1 1.432e-13
Internal
sp_v3.0_unigene193617 SustainPine v3.0 515
• AutoFact: RAB family member (rab-11.1) [Caenorhabditis elegans] gb|AAB54158.1| Rab family protein 11.1 [Caenorhabditis elegans] 9.94922e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ras-related protein Rab11C 7.802e-15
C-terminus
sp_v3.0_unigene193648 SustainPine v3.0 511
• AutoFact: RAB2A, member RAS oncogene family n=2 Tax=Bos taurus RepID=Q148J4_BOVIN 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ras-related protein Rab11A 6.416e-15
N-terminus
sp_v3.0_unigene199971 SustainPine v3.0 217
• AutoFact: PREDICTED: ras-related protein Rab-7a-like [Apis mellifera] 2.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ras-related protein Rab7 7.521e-13
Putative N-terminus
sp_v3.0_unigene200077 SustainPine v3.0 544
• AutoFact: Rab GTPase n=1 Tax=Dictyostelium fasciculatum RepID=F4PVW1_9MYCE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Rab8/RabE-family small GTPase 0.0
Putative N-terminus
sp_v3.0_unigene201705 SustainPine v3.0 191
• AutoFact: 60S ribosomal protein L5, mitochondrial n=4 Tax=rosids RepID=RM05_ARATH 3.0e-25
• FL-Next: sp=60S ribosomal protein L5, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
• Sma3: Mitochondrial ribosomal protein L5 4.2039e-45
Putative C-terminus
sp_v3.0_unigene201885 SustainPine v3.0 819
• AutoFact: Ras-related protein Rab-18 [Arabidopsis thaliana] ref|NP_001077675.1| Ras-related protein Rab-18 [Arabidopsis thaliana] ref|NP_001117435.1| Ras-related protein Rab-18 [Arabidopsis thaliana] sp|O23657.1|RABC1_ARATH RecName: Full=Ras-related protein RABC1; 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Rab18/RabC-family small GTPase 1.124e-19
Putative Complete
sp_v3.0_unigene202344 SustainPine v3.0 407
• AutoFact: Ara-5;GTP-binding protein (Fragment) n=1 Tax=Arabidopsis thaliana RepID=Q42089_ARATH 2.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: GTP-binding protein 2.694e-14
N-terminus
sp_v3.0_unigene205472 SustainPine v3.0 498
• AutoFact: Ras-related protein Rab-5A n=2 Tax=Dictyostelium RepID=RAB5A_DICDI 4.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ras-related protein RHN1 2.683e-13
Putative C-terminus
sp_v3.0_unigene205502 SustainPine v3.0 714
• AutoFact: PREDICTED: similar to RAB18, member RAS oncogene family isoform 2 n=1 Tax=Ciona intestinalis RepID=UPI000180C875 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Small GTP-binding protein 9.666e-22
Complete
sp_v3.0_unigene205517 SustainPine v3.0 293
• AutoFact: Rab GTPase n=1 Tax=Dictyostelium fasciculatum RepID=F4PJV4_9MYCE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ras-related protein Rab7 2.899e-16
Internal
sp_v3.0_unigene205555 SustainPine v3.0 575
• AutoFact: GTP-binding protein o-rab1 n=1 Tax=Trichoplax adhaerens RepID=B3RKM7_TRIAD 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Small GTP-binding protein 1.372e-19
N-terminus
sp_v3.0_unigene205692 SustainPine v3.0 550
• AutoFact: Rab1/RabD-family small GTPase n=7 Tax=Embryophyta RepID=A9SLS3_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Putative N-terminus
sp_v3.0_unigene205714 SustainPine v3.0 393
• AutoFact: Ras-related protein Rab-7A n=3 Tax=Dictyosteliida RepID=RAB7A_DICDI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ras-related protein Rab7 3.02e-16
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain