Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Ribosomal protein L13e, conserved site

Term: IPR018256  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene375 SustainPine v3.0 1354
AutoFact: 60S ribosomal protein L13 n=4 Tax=Picea RepID=A9NTR4_PICSI 0.0
FL-Next: sp=60S ribosomal protein L13; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L13 0.0
Complete
sp_v3.0_unigene1022 SustainPine v3.0 1073
AutoFact: 60S ribosomal protein L13 n=4 Tax=Picea RepID=A9NTR4_PICSI 0.0
FL-Next: sp=60S ribosomal protein L13; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L13 0.0
Complete
sp_v3.0_unigene24673 SustainPine v3.0 347
AutoFact: 60S ribosomal protein L13 n=4 Tax=Picea RepID=A9NTR4_PICSI 7.0e-21
FL-Next: sp=60S ribosomal protein L13; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L13 0.0
N-terminus
sp_v3.0_unigene24783 SustainPine v3.0 505
AutoFact: PREDICTED: similar to ribosomal protein L13 n=1 Tax=Ciona intestinalis RepID=UPI00006A7442 2.0e-29
FL-Next: sp=60S ribosomal protein L13; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L13 0.0
C-terminus
sp_v3.0_unigene25802 SustainPine v3.0 527
AutoFact: PREDICTED: 60S ribosomal protein L13 isoform 1 n=1 Tax=Apis mellifera RepID=UPI0000516EED 4.0e-34
FL-Next: sp=60S ribosomal protein L13; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: 60S ribosomal protein L13 0.0
N-terminus
sp_v3.0_unigene25962 SustainPine v3.0 549
AutoFact: 60S ribosomal protein L13 n=1 Tax=Polytomella sp. Pringsheim 198.80 RepID=Q84VS7_9CHLO 6.0e-38
FL-Next: sp=60S ribosomal protein L13; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L13 0.0
C-terminus
sp_v3.0_unigene26274 SustainPine v3.0 728
AutoFact: 60S ribosomal protein L13 (Fragment) n=1 Tax=Chironomus thummi RepID=A2IA72_9DIPT 0.0
FL-Next: sp=60S ribosomal protein L13; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L13 0.0
Complete
sp_v3.0_unigene27403 SustainPine v3.0 737
AutoFact: 60S ribosomal protein L13 n=1 Tax=Xenopsylla cheopis RepID=A2IAC5_9NEOP 0.0
FL-Next: sp=60S ribosomal protein L13; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L13 0.0
Putative Complete
sp_v3.0_unigene30833 SustainPine v3.0 713
AutoFact: 60S ribosomal protein L13 n=1 Tax=Nematostella vectensis RepID=A7S405_NEMVE 0.0
FL-Next: sp=60S ribosomal protein L13; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L13 0.0
Complete
sp_v3.0_unigene31143 SustainPine v3.0 602
AutoFact: 60S ribosomal protein L13 n=1 Tax=Lysiphlebus testaceipes RepID=Q56FE7_LYSTE 4.2039e-45
FL-Next: sp=60S ribosomal protein L13; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L13 0.0
C-terminus
sp_v3.0_unigene31681 SustainPine v3.0 469
AutoFact: PREDICTED: 60S ribosomal protein L13 isoform 1 n=1 Tax=Apis mellifera RepID=UPI0000516EED 9.0e-37
FL-Next: sp=60S ribosomal protein L13; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: 60S ribosomal protein L13 0.0
Putative C-terminus
sp_v3.0_unigene32841 SustainPine v3.0 1126
AutoFact: 60S ribosomal protein L13 n=4 Tax=Picea RepID=A9NTR4_PICSI 0.0
FL-Next: sp=60S ribosomal protein L13; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: 60S ribosomal protein L13 0.0
Complete
sp_v3.0_unigene33156 SustainPine v3.0 426
AutoFact: 60S ribosomal protein L13 n=1 Tax=Glycine max RepID=C6SYZ4_SOYBN 9.0e-21
FL-Next: sp=60S ribosomal protein L13; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: 60S ribosomal protein L13 0.0
N-terminus
sp_v3.0_unigene35906 SustainPine v3.0 631
AutoFact: 60S ribosomal protein L13 n=7 Tax=Clupeocephala RepID=RL13_DANRE 0.0
FL-Next: sp=60S ribosomal protein L13; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L13 0.0
Putative Complete
sp_v3.0_unigene36662 SustainPine v3.0 340
AutoFact: 60S ribosomal protein L13 n=4 Tax=Picea RepID=A9NTR4_PICSI 2.0e-08
FL-Next: sp=60S ribosomal protein L13; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L13 0.0
C-terminus
sp_v3.0_unigene37787 SustainPine v3.0 733
AutoFact: 60S ribosomal protein L13 n=4 Tax=Picea RepID=A9NTR4_PICSI 0.0
FL-Next: sp=60S ribosomal protein L13; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L13 0.0
C-terminus
sp_v3.0_unigene51888 SustainPine v3.0 154
AutoFact: 60S ribosomal protein L13 n=4 Tax=Picea RepID=A9NTR4_PICSI 1.0e-06
FL-Next: sp=60S ribosomal protein L13; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: 60S ribosomal protein L13 5.146e-08
Putative C-terminus
sp_v3.0_unigene59765 SustainPine v3.0 236
AutoFact: 60S ribosomal protein L13 n=4 Tax=Picea RepID=A9NTR4_PICSI 7.0e-16
FL-Next: sp=60S ribosomal protein L13; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L13 1.393e-20
Internal
sp_v3.0_unigene60358 SustainPine v3.0 402
AutoFact: 60S ribosomal protein L13 (Fragment) n=4 Tax=Populus trichocarpa RepID=B9IIX6_POPTR 2.0e-38
FL-Next: sp=60S ribosomal protein L13; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: 60S ribosomal protein L13 0.0
C-terminus
sp_v3.0_unigene75962 SustainPine v3.0 224
AutoFact: 60S ribosomal protein L13 n=4 Tax=Picea RepID=A9NTR4_PICSI 7.0e-15
FL-Next: sp=60S ribosomal protein L13; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L13 0.0
Misassembled

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain