Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Ribosomal protein L13e, conserved site

Term: IPR018256  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene76346 SustainPine v3.0 339
• AutoFact: 60S ribosomal protein L13 n=1 Tax=Laccaria bicolor S238N-H82 RepID=B0CPG6_LACBS 4.99983e-42
• FL-Next: sp=60S ribosomal protein L13; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L13 0.0
N-terminus
sp_v3.0_unigene120157 SustainPine v3.0 273
• AutoFact: 60S ribosomal protein L13 n=1 Tax=Laccaria bicolor S238N-H82 RepID=B0CPG6_LACBS 6.0e-30
• FL-Next: sp=60S ribosomal protein L13; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: 60S ribosomal protein L13 0.0
N-terminus
sp_v3.0_unigene144877 SustainPine v3.0 423
• AutoFact: 60S ribosomal protein L13 n=4 Tax=Picea RepID=A9NTR4_PICSI 2.8026e-45
• FL-Next: sp=60S ribosomal protein L13; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L13 0.0
N-terminus
sp_v3.0_unigene144918 SustainPine v3.0 257
• AutoFact: 60S ribosomal protein L13 n=2 Tax=Elaeis guineensis RepID=B3TM24_ELAGV 5.0e-18
• FL-Next: sp=60S ribosomal protein L13; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L13 2.088e-40
Putative C-terminus
sp_v3.0_unigene150499 SustainPine v3.0 263
• AutoFact: 60S ribosomal protein L13 (Fragment) n=1 Tax=Arenicola marina RepID=A8UF36_AREMA 2.0e-15
• FL-Next: sp=60S ribosomal protein L13; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: 60S ribosomal protein L13 1.955e-23
Internal
sp_v3.0_unigene151688 SustainPine v3.0 271
• AutoFact: 60S ribosomal protein L13 n=1 Tax=Glycine max RepID=C6SYD1_SOYBN 4.0e-20
• FL-Next: sp=60S ribosomal protein L13; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: 60S ribosomal protein L13 0.0
Internal
sp_v3.0_unigene153484 SustainPine v3.0 399
• AutoFact: 60S ribosomal protein L13 n=2 Tax=Solanum RepID=Q3HRY7_SOLTU 3.0e-26
• FL-Next: sp=60S ribosomal protein L13; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: 60S ribosomal protein L13 0.0
Internal
sp_v3.0_unigene154031 SustainPine v3.0 452
• AutoFact: 60S ribosomal protein L13 n=7 Tax=Clupeocephala RepID=RL13_DANRE 5.99994e-41
• FL-Next: sp=60S ribosomal protein L13; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L13 0.0
C-terminus
sp_v3.0_unigene155359 SustainPine v3.0 414
• AutoFact: 60S ribosomal protein L13 [Schizosaccharomyces pombe 972h-] sp|O74175.1|RL13_SCHPO RecName: Full=60S ribosomal protein L13 dbj|BAA31740.1| ribosomal protein L13 homolog [Schizosaccharomyces pombe] emb|CAB65806.1| 60S ribosomal protein L13 [Schizosaccharom 4.0e-37
• FL-Next: sp=60S ribosomal protein L13; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: 60S ribosomal protein L13 0.0
Putative N-terminus
sp_v3.0_unigene155642 SustainPine v3.0 531
• AutoFact: 60S ribosomal protein L13 n=1 Tax=Glycine max RepID=C6SYZ4_SOYBN 6.0e-33
• FL-Next: sp=60S ribosomal protein L13; Glycine max (Soybean) (Glycine hispida). 0.0
• Sma3: 60S ribosomal protein L13 0.0
Complete
sp_v3.0_unigene157117 SustainPine v3.0 401
• AutoFact: 60S ribosomal protein L13 n=1 Tax=Malassezia globosa CBS 7966 RepID=A8QA08_MALGO 2.0e-35
• FL-Next: sp=60S ribosomal protein L13; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: 60S ribosomal protein L13 0.0
N-terminus
sp_v3.0_unigene157394 SustainPine v3.0 198
• AutoFact: 60S ribosomal protein L13 n=1 Tax=Polytomella sp. Pringsheim 198.80 RepID=Q84VS7_9CHLO 1.0e-10
• FL-Next: sp=60S ribosomal protein L13; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: 60S ribosomal protein L13 3.903e-08
N-terminus
sp_v3.0_unigene157397 SustainPine v3.0 395
• AutoFact: 60S ribosomal protein L13 n=1 Tax=Lysiphlebus testaceipes RepID=Q56FE7_LYSTE 1.0e-21
• FL-Next: sp=60S ribosomal protein L13; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L13 3.44397e-41
C-terminus
sp_v3.0_unigene157487 SustainPine v3.0 518
• AutoFact: 60S ribosomal protein L13 n=3 Tax=Onchocercidae RepID=A8QB05_BRUMA 5.60519e-45
• FL-Next: sp=60S ribosomal protein L13; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L13 0.0
N-terminus
sp_v3.0_unigene157912 SustainPine v3.0 357
• AutoFact: Probable ribosomal protein L13B n=2 Tax=Ustilaginaceae RepID=E7A1G2_9BASI 1.0e-36
• FL-Next: sp=60S ribosomal protein L13; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L13 0.0
N-terminus
sp_v3.0_unigene158771 SustainPine v3.0 241
• AutoFact: 60S ribosomal protein L13 n=2 Tax=Branchiostoma RepID=C3YFH5_BRAFL 3.0e-05
• FL-Next: sp=60S ribosomal protein L13; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: BBC1 protein homolog 5.361e-06
N-terminus
sp_v3.0_unigene159169 SustainPine v3.0 455
• AutoFact: 60S ribosomal protein L13 n=13 Tax=Poaceae RepID=Q7XJB4_ORYSJ 2.0e-35
• FL-Next: sp=60S ribosomal protein L13; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L13 0.0
N-terminus
sp_v3.0_unigene159318 SustainPine v3.0 570
• AutoFact: 60S ribosomal protein L13 n=7 Tax=Clupeocephala RepID=RL13_DANRE 0.0
• FL-Next: sp=60S ribosomal protein L13; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L13 0.0
Putative C-terminus
sp_v3.0_unigene161674 SustainPine v3.0 391
• AutoFact: 60S ribosomal protein L13 n=13 Tax=Poaceae RepID=Q7XJB4_ORYSJ 2.0e-32
• FL-Next: sp=60S ribosomal protein L13; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: 60S ribosomal protein L13 0.0
N-terminus
sp_v3.0_unigene161677 SustainPine v3.0 466
• AutoFact: 60S ribosomal protein L13 n=1 Tax=Volvox carteri f. nagariensis RepID=D8U1M5_VOLCA 2.0e-39
• FL-Next: sp=60S ribosomal protein L13; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: 60S ribosomal protein L13 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain