Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Nucleotide-binding, alpha-beta plait

Term: IPR012677  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene201400 SustainPine v3.0 710
• AutoFact: Very similar to receptor-like serine/threonine kinase [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP binding protein, putative 2.315e-13
Putative C-terminus
sp_v3.0_unigene202139 SustainPine v3.0 993
• AutoFact: Os03g0569900 protein (Fragment) n=5 Tax=Oryza sativa RepID=Q0DQQ8_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nuclear acid binding protein, putative 1.212e-22
C-terminus
sp_v3.0_unigene202801 SustainPine v3.0 531
• AutoFact: Ribosomal protein rpl23a (Fragment) n=1 Tax=Lineus viridis RepID=B0Z9M5_9BILA 1.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L23a 3.922e-09
Complete
sp_v3.0_unigene202821 SustainPine v3.0 516
• AutoFact: 60S ribosomal protein L25 n=4 Tax=Pleosporineae RepID=B2VU63_PYRTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L23a 2.642e-10
Complete
sp_v3.0_unigene203081 SustainPine v3.0 396
• AutoFact: 40S ribosomal protein S24 n=2 Tax=Picea sitchensis RepID=A9NKN3_PICSI 3.0e-40
• FL-Next: sp=40S ribosomal protein S24; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S24 0.0
N-terminus
sp_v3.0_unigene203549 SustainPine v3.0 579
• AutoFact: 40S ribosomal protein S24 n=2 Tax=Picea sitchensis RepID=A9NKN3_PICSI 0.0
• FL-Next: sp=40S ribosomal protein S24; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S24 0.0
Complete
sp_v3.0_unigene204447 SustainPine v3.0 463
• AutoFact: 40S ribosomal protein S24 n=1 Tax=Polysphondylium pallidum RepID=D3BM86_POLPA 1.0e-30
• FL-Next: sp=40S ribosomal protein S24; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S24 0.0
Putative Complete
sp_v3.0_unigene204625 SustainPine v3.0 411
• AutoFact: glycine-rich RNA-binding protein 2 [Arabidopsis thaliana] gb|AEE83336.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana] 3.0e-22
• FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
• Sma3: Glycine-rich RNA-binding protein 0.0
Complete
sp_v3.0_unigene204746 SustainPine v3.0 395
• AutoFact: polyadenylate-binding protein [Cryptococcus neoformans var. neoformans JEC21] ref|XP_774065.1| hypothetical protein CNBH1100 [Cryptococcus neoformans var. neoformans B-3501A] sp|P0CP47.1|PABP_CRYNB RecName: Full=Polyadenylate-binding protein, cytoplasmic 1.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Poly(A)-binding protein 1.867e-20
Putative C-terminus
sp_v3.0_unigene204854 SustainPine v3.0 282
• AutoFact: Homeobox-leucine zipper protein HOX23 n=3 Tax=Oryza sativa RepID=HOX23_ORYSJ 3.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Homeobox protein, putative 2.154e-18
Internal
sp_v3.0_unigene204873 SustainPine v3.0 466
• AutoFact: Ribosomal protein, putative n=3 Tax=Filobasidiella/Cryptococcus neoformans species complex RepID=E6R2E5_CRYGW 5.60519e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L23a 2.642e-10
Putative Complete
sp_v3.0_unigene205277 SustainPine v3.0 394
• AutoFact: Plastidic phosphate translocator-like protein1 n=1 Tax=Mesembryanthemum crystallinum RepID=Q59IV6_MESCR 5.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Plastidic phosphate translocator-like protein1 2.564e-11
Putative C-terminus
sp_v3.0_unigene205516 SustainPine v3.0 515
• AutoFact: 40S ribosomal protein S24 n=1 Tax=Polysphondylium pallidum RepID=D3BM86_POLPA 4.0e-31
• FL-Next: sp=40S ribosomal protein S24; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S24 0.0
Putative Complete
sp_v3.0_unigene205572 SustainPine v3.0 505
• AutoFact: Ribosomal protein rpl23a (Fragment) n=1 Tax=Lineus viridis RepID=B0Z9M5_9BILA 3.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L23a 3.449e-09
Complete
sp_v3.0_unigene205666 SustainPine v3.0 431
• AutoFact: GRP multi-domain protein 3.0e-14
• Sma3: Putative glycine rich protein 1.101e-24
coding
sp_v3.0_unigene206478 SustainPine v3.0 470
• AutoFact: Unassigned protein 1.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nuclear acid binding protein, putative 4.413e-12
C-terminus
sp_v3.0_unigene206628 SustainPine v3.0 357
• AutoFact: U2-associated protein SR140 [Arabidopsis thaliana] gb|AAK25922.1|AF360212_1 unknown protein [Arabidopsis thaliana] gb|AAK64118.1| unknown protein [Arabidopsis thaliana] gb|AED93395.1| U2-associated protein SR140 [Arabidopsis thaliana] 3.0e-11
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
N-terminus
sp_v3.0_unigene206648 SustainPine v3.0 470
• AutoFact: Unassigned protein 3.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene207821 SustainPine v3.0 480
• AutoFact: Os03g0374575 protein n=4 Tax=Oryza sativa RepID=C7J0R1_ORYSJ 6.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Serine/arginine rich splicing factor, putative 3.74e-08
Putative Complete
sp_v3.0_unigene207928 SustainPine v3.0 348
• AutoFact: RRM_1 domain containing protein 3.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain