Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: Nucleotide-binding, alpha-beta plait

Term: IPR012677  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene188485 SustainPine v3.0 449
AutoFact: 60S ribosomal protein L23a n=2 Tax=Zea mays RepID=B6TN30_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L23a 3.983e-09
C-terminus
sp_v3.0_unigene188530 SustainPine v3.0 530
AutoFact: PREDICTED: similar to ribosomal protein L23a n=1 Tax=Ciona intestinalis RepID=UPI00006A76DE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L23a 3.983e-09
Complete
sp_v3.0_unigene189124 SustainPine v3.0 802
AutoFact: peroxidase 56 [Arabidopsis thaliana] sp|Q9LXG3.1|PER56_ARATH RecName: Full=Peroxidase 56; Short=Atperox P56; AltName: Full=ATP33; Flags: Precursor emb|CAB89328.1| prx10 peroxidase-like protein [Arabidopsis thaliana] gb|AAL59994.1| putative prx10 peroxidas 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Peroxidase 1.846e-25
C-terminus
sp_v3.0_unigene189216 SustainPine v3.0 1311
AutoFact: plastidic phosphate translocator-like protein1 [Mesembryanthemum crystallinum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Plastidic phosphate translocator-like protein1 1.781e-10
Putative Complete
sp_v3.0_unigene189283 SustainPine v3.0 621
AutoFact: CCR4-NOT transcription complex subunit 4 [Arabidopsis thaliana] emb|CAB75492.1| putative protein [Arabidopsis thaliana] gb|AEE78053.1| CCR4-NOT transcription complex subunit 4 [Arabidopsis thaliana] 4.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene189340 SustainPine v3.0 404
AutoFact: Jun multi-domain protein 1.0e-05
coding
sp_v3.0_unigene189926 SustainPine v3.0 177
AutoFact: Gly_rich multi-domain protein 1.0e-09
unknown
sp_v3.0_unigene189946 SustainPine v3.0 154
AutoFact: PREDICTED: similar to ribosomal protein L23a [Strongylocentrotus purpuratus] ref|XP_792948.2| PREDICTED: similar to ribosomal protein L23a [Strongylocentrotus purpuratus] 2.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L23a 2.351e-09
C-terminus
sp_v3.0_unigene190173 SustainPine v3.0 853
AutoFact: 60S ribosomal protein L23a n=1 Tax=Phytophthora infestans T30-4 RepID=D0MWZ9_PHYIT 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L23a 3.983e-09
Complete
sp_v3.0_unigene190190 SustainPine v3.0 397
AutoFact: GRP multi-domain protein 2.0e-11
Sma3: Putative glycine rich protein 6.261e-22
coding
sp_v3.0_unigene190453 SustainPine v3.0 360
AutoFact: Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SBS3_PHYPA 7.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pre-mRNA branch site p14-like protein 6.096e-09
N-terminus
sp_v3.0_unigene190483 SustainPine v3.0 473
AutoFact: Cold shock protein n=1 Tax=Bermanella marisrubri RepID=Q1N1Z0_9GAMM 7.0e-18
FL-Next: tr=Cold shock domain containing proteins, putative; Ricinus communis (Castor bean). 0.0
Sma3: Glycine-rich protein 2b 2.893e-08
Complete
sp_v3.0_unigene190499 SustainPine v3.0 426
AutoFact: KRTAP multi-domain protein 2.0e-09
coding
sp_v3.0_unigene190804 SustainPine v3.0 496
AutoFact: RNase P protein subunit [Dictyostelium discoideum AX4] gb|EAL66686.1| RNase P protein subunit [Dictyostelium discoideum AX4] 0.0001
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Os08g0192900 protein 8.285e-06
Putative C-terminus
sp_v3.0_unigene190854 SustainPine v3.0 393
AutoFact: Splicing factor U2af 38 kDa subunit n=1 Tax=Salpingoeca sp. ATCC 50818 RepID=F2UL33_9EUKA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: U2 snrnp auxiliary factor, small subunit, putative 2.461e-11
Internal
sp_v3.0_unigene191127 SustainPine v3.0 194
AutoFact: Ribosomal_S24e domain containing protein 8.0e-07
Sma3: 40S ribosomal protein S24 7.00649e-44
unknown
sp_v3.0_unigene191273 SustainPine v3.0 272
AutoFact: PREDICTED: similar to U1 small nuclear ribonucleoprotein A [Nasonia vitripennis] 1.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene191756 SustainPine v3.0 354
AutoFact: 60S rat ribosomal protein L23 n=2 Tax=Sclerotiniaceae RepID=A6SFR7_BOTFB 9.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L23a 2.554e-10
C-terminus
sp_v3.0_unigene191815 SustainPine v3.0 559
AutoFact: Putative rrm-type rna binding protein n=2 Tax=Metarhizium RepID=E9ECY5_METAQ 2.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Polyadenylate-binding protein 2 2.539e-15
C-terminus
sp_v3.0_unigene191958 SustainPine v3.0 472
AutoFact: PREDICTED: ribosomal protein L23a-like isoform 1 n=3 Tax=Eutheria RepID=UPI0001D56DBB 1.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L23a 1.992e-10
Putative Complete

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain