Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Nucleotide-binding, alpha-beta plait

Term: IPR012677  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene166271 SustainPine v3.0 521
• AutoFact: ribosomal protein [Cryptococcus neoformans var. neoformans JEC21] ref|XP_776299.1| hypothetical protein CNBC6880 [Cryptococcus neoformans var. neoformans B-3501A] gb|EAL21652.1| hypothetical protein CNBC6880 [Cryptococcus neoformans var. neoformans B-3501 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L23a 3.983e-09
Complete
sp_v3.0_unigene166277 SustainPine v3.0 283
• AutoFact: [J] COG2004 Ribosomal protein S24E 3.0e-24
• FL-Next: sp=40S ribosomal protein S24; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S24 0.0
N-terminus
sp_v3.0_unigene166339 SustainPine v3.0 222
• AutoFact: Receptor-like kinase n=1 Tax=Marchantia polymorpha RepID=A7VM40_MARPO 1.0e-21
• FL-Next: tr=Uncharacterized protein; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
• Sma3: Kinase, putative 1.3e-13
Internal
sp_v3.0_unigene166464 SustainPine v3.0 266
• AutoFact: Plastidic phosphate translocator-like protein1 n=1 Tax=Mesembryanthemum crystallinum RepID=Q59IV6_MESCR 5.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Plastidic phosphate translocator-like protein1 2.523e-11
Internal
sp_v3.0_unigene166675 SustainPine v3.0 335
• AutoFact: 40S ribosomal protein S24 n=2 Tax=Pucciniales RepID=E3KHX8_PUCGT 6.0e-36
• FL-Next: sp=40S ribosomal protein S24; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S24 0.0
C-terminus
sp_v3.0_unigene166750 SustainPine v3.0 364
• AutoFact: nuclear cap-binding protein subunit 2 [Bombyx mori] sp|Q1HE01.1|NCBP2_BOMMO RecName: Full=Nuclear cap-binding protein subunit 2; AltName: Full=20 kDa nuclear cap-binding protein; AltName: Full=NCBP 20 kDa subunit; Short=CBP20 gb|ABF55961.1| Cbp20 [Bombyx 2.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nuclear cap-binding protein 1.619e-11
N-terminus
sp_v3.0_unigene166753 SustainPine v3.0 128
• AutoFact: Splicing factor U2AF 26 kDa subunit n=2 Tax=Agaricales RepID=A8N5I3_COPC7 6.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: U2 snrnp auxiliary factor, small subunit, putative 2.196e-11
N-terminus
sp_v3.0_unigene166760 SustainPine v3.0 263
• AutoFact: RNA-binding protein [Brassica juncea] 7.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heterogeneous nuclear ribonucleoprotein 27C 1.777e-09
Internal
sp_v3.0_unigene166783 SustainPine v3.0 284
• AutoFact: 60S ribosomal protein L25 n=4 Tax=Pleosporineae RepID=B2VU63_PYRTR 4.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene167028 SustainPine v3.0 232
• AutoFact: putative strictosidine synthase [Oryza sativa Japonica Group] gb|ABF98899.1| Strictosidine synthase family protein, expressed [Oryza sativa Japonica Group] gb|EAY91875.1| hypothetical protein OsI_13523 [Oryza sativa Indica Group] 9.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative strictosidine synthase 5.639e-16
Internal
sp_v3.0_unigene167062 SustainPine v3.0 285
• AutoFact: splicing factor 1 [Arabidopsis thaliana] ref|NP_851169.1| splicing factor 1 [Arabidopsis thaliana] ref|NP_001032055.1| splicing factor 1 [Arabidopsis thaliana] dbj|BAA97393.1| unnamed protein product [Arabidopsis thaliana] gb|AAN13087.1| unknown protein [ 2.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene167129 SustainPine v3.0 256
• AutoFact: Chaperone protein dnaJ, putative n=2 Tax=fabids RepID=B9RQ46_RICCO 4.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DnaJ-like protein 1.034e-13
Putative N-terminus
sp_v3.0_unigene167195 SustainPine v3.0 293
• AutoFact: zinc finger CCCH domain-containing protein 46 [Arabidopsis thaliana] ref|NP_001030840.1| zinc finger CCCH domain-containing protein 46 [Arabidopsis thaliana] sp|Q9SV09.1|C3H46_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 46; Short=AtC3H4 7.0e-18
• FL-Next: sp=Zinc finger CCCH domain-containing protein 46; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
sp_v3.0_unigene167492 SustainPine v3.0 361
• AutoFact: splicing factor [Arabidopsis thaliana] 4.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene167669 SustainPine v3.0 175
• AutoFact: putative phosphate/phosphoenolpyruvate translocator protein [Arabidopsis thaliana] sp|Q9SKJ7.1|PT225_ARATH RecName: Full=Probable sugar phosphate/phosphate translocator At2g25520 gb|AAD20711.1| putative phosphate/phosphoenolpyruvate translocator protein [ 2.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Plastidic phosphate translocator-like protein1 1.451e-11
Putative N-terminus
sp_v3.0_unigene167678 SustainPine v3.0 160
unknown
sp_v3.0_unigene167701 SustainPine v3.0 241
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene167954 SustainPine v3.0 220
• AutoFact: receptor ser/thr protein kinase-like [Oryza sativa Japonica Group] dbj|BAD25902.1| receptor ser/thr protein kinase-like [Oryza sativa Japonica Group] 7.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome undetermined scaffold_302, whole genome shotgun sequence 6.089e-08
Internal
sp_v3.0_unigene167988 SustainPine v3.0 253
• AutoFact: receptor ser/thr protein kinase-like [Oryza sativa Japonica Group] dbj|BAD25902.1| receptor ser/thr protein kinase-like [Oryza sativa Japonica Group] 2.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Serine/threonine-protein kinase receptor 1.366e-14
Internal
sp_v3.0_unigene168073 SustainPine v3.0 222
• AutoFact: Unassigned protein 1.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain