Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: WD40-repeat-containing domain

Term: IPR017986  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene197589 SustainPine v3.0 155
• AutoFact: F-box and wd40 domain protein, putative n=1 Tax=Ricinus communis RepID=B9S2J3_RICCO 3.0e-14
• FL-Next: tr=F-box and wd40 domain protein, putative; Ricinus communis (Castor bean). 0.0
• Sma3: F-box and wd40 domain protein, putative 3.321e-13
Internal
sp_v3.0_unigene198267 SustainPine v3.0 505
• AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9RVD2_RICCO 9.00054e-42
• FL-Next: sp=Topless-related protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene198392 SustainPine v3.0 524
• AutoFact: 60s ribosomal protein l21-a [Coprinopsis cinerea okayama7#130] gb|EAU92440.1| 60s ribosomal protein l21-a [Coprinopsis cinerea okayama7#130] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L21 3.591e-10
Putative Complete
sp_v3.0_unigene199091 SustainPine v3.0 315
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene199659 SustainPine v3.0 471
• AutoFact: Guanine nucleotide-binding protein subunit beta-2-like protein (Fragment) n=1 Tax=Angiostrongylus cantonensis RepID=F5GTH9_9BILA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Guanine nucleotide-binding protein subunit beta-like protein 2.996e-18
N-terminus
sp_v3.0_unigene199813 SustainPine v3.0 246
• AutoFact: Notchless protein homolog 1 (Fragment) n=3 Tax=Euteleostei RepID=C0PUL3_SALSA 1.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Wd-40 repeat family protein/notchless protein 5.028e-09
Putative Complete
sp_v3.0_unigene200080 SustainPine v3.0 538
• AutoFact: PREDICTED: WD repeat-containing protein 16-like n=1 Tax=Anolis carolinensis RepID=UPI0002038817 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene200243 SustainPine v3.0 746
• AutoFact: ARp2/3 compleX component family member (arx-3) [Caenorhabditis elegans] emb|CAB54510.1| C. elegans protein Y79H2A.6, confirmed by transcript evidence [Caenorhabditis elegans] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene200402 SustainPine v3.0 522
• AutoFact: Coronin n=1 Tax=Naegleria gruberi RepID=D2VLM1_NAEGR 3.0e-39
• FL-Next: tr=Putative uncharacterized protein; Ectocarpus siliculosus (Brown alga). 0.0
Internal
sp_v3.0_unigene201378 SustainPine v3.0 562
• AutoFact: Translation initiation factor eIF-5A, promotes formation of the first peptide bond n=2 Tax=Pichia pastoris RepID=C4R6C4_PICPG 0.0
• FL-Next: tr=Eukaryotic translation initiation factor 5A; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Eukaryotic translation initiation factor 5A 5.371e-28
Complete
sp_v3.0_unigene201648 SustainPine v3.0 635
• AutoFact: protein TOPLESS [Arabidopsis thaliana] ref|NP_849672.1| protein TOPLESS [Arabidopsis thaliana] ref|NP_001031050.1| protein TOPLESS [Arabidopsis thaliana] ref|NP_001031051.1| protein TOPLESS [Arabidopsis thaliana] sp|Q94AI7.1|TPL_ARATH RecName: Full=Protei 9.0e-21
• FL-Next: sp=Topless-related protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: WD-40 repeat protein-like 4.194e-07
Internal
sp_v3.0_unigene201873 SustainPine v3.0 504
• AutoFact: Translation initiation factor eIF-5A family protein n=1 Tax=Tetrahymena thermophila SB210 RepID=Q23BQ5_TETTH 1.0e-36
• FL-Next: tr=Eukaryotic translation initiation factor 5A; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Eukaryotic translation initiation factor 5A 5.818e-28
Putative Complete
sp_v3.0_unigene202139 SustainPine v3.0 993
• AutoFact: Os03g0569900 protein (Fragment) n=5 Tax=Oryza sativa RepID=Q0DQQ8_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nuclear acid binding protein, putative 1.212e-22
C-terminus
sp_v3.0_unigene202620 SustainPine v3.0 588
• AutoFact: Ribosomal protein L21 n=1 Tax=Lepidochitona cinerea RepID=E3P7F3_9MOLL 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L21 3.591e-10
Complete
sp_v3.0_unigene202891 SustainPine v3.0 517
• AutoFact: 60S ribosomal protein L21 n=1 Tax=Cyanophora paradoxa RepID=RL21_CYAPA 1.99993e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L21 3.84e-10
N-terminus
sp_v3.0_unigene203061 SustainPine v3.0 576
• AutoFact: Probable 60s ribosomal protein L21-A n=2 Tax=Ustilaginaceae RepID=E6ZV43_9BASI 4.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L21 4.034e-10
Complete
sp_v3.0_unigene203573 SustainPine v3.0 550
• AutoFact: Ribosomal protein L21 n=8 Tax=Endopterygota RepID=D1LYQ2_MANSE 2.94273e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L21 3.471e-10
Complete
sp_v3.0_unigene203714 SustainPine v3.0 516
• AutoFact: Eukaryotic translation initiation factor 5A-1 n=5 Tax=core eudicotyledons RepID=IF5A1_ARATH 2.00386e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Eukaryotic translation initiation factor 5A 5.371e-28
Complete
sp_v3.0_unigene204434 SustainPine v3.0 571
• AutoFact: Probable 60s ribosomal protein L21-A n=2 Tax=Ustilaginaceae RepID=E6ZV43_9BASI 7.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L21 3.591e-10
Complete
sp_v3.0_unigene204566 SustainPine v3.0 438
• AutoFact: Eukaryotic translation initiation factor 5A-2 n=3 Tax=Ascaris suum RepID=F1L9I9_ASCSU 8.0e-30
• FL-Next: tr=Eukaryotic translation initiation factor 5A 4; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Eukaryotic translation initiation factor 5A 7.476e-28
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain