Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: WD40-repeat-containing domain

Term: IPR017986  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene190450 SustainPine v3.0 343
• AutoFact: U3 snoRNP-associated protein Utp7 n=1 Tax=Ectocarpus siliculosus RepID=D7FNZ6_ECTSI 1.0e-18
• FL-Next: tr=U3 snoRNP-associated protein Utp7; Ectocarpus siliculosus (Brown alga). 0.0
Internal
sp_v3.0_unigene190581 SustainPine v3.0 331
• AutoFact: PREDICTED: similar to block of proliferation 1 n=1 Tax=Hydra magnipapillata RepID=UPI0001926A5E 9.0e-37
• FL-Next: sp=Ribosome biogenesis protein BOP1 homolog; Chlamydomonas reinhardtii (Chlamydomonas smithii). 0.0
• Sma3: Putative WD-40 repeat protein 5.991e-07
Internal
sp_v3.0_unigene190623 SustainPine v3.0 488
• AutoFact: 60s ribosomal protein L21 [Triticum aestivum] 1.99993e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L21 4.034e-10
Putative Complete
sp_v3.0_unigene190639 SustainPine v3.0 365
• AutoFact: Eukaryotic initiation factor 4A-III n=1 Tax=Caligus clemensi RepID=C1C237_9MAXI 3.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 9.226e-09
N-terminus
sp_v3.0_unigene191246 SustainPine v3.0 483
• AutoFact: Eukaryotic initiation factor 4A-III, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0N6A8_PHYIT 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 3.282e-09
C-terminus
sp_v3.0_unigene191383 SustainPine v3.0 534
• AutoFact: Probable eukaryotic initiation factor 4A n=5 Tax=Trypanosoma RepID=IF4A_TRYBB 7.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 2 4.041e-08
C-terminus
sp_v3.0_unigene191521 SustainPine v3.0 409
• AutoFact: Pre-mRNA splicing factor n=1 Tax=Cucumis melo subsp. melo RepID=E5GBJ7_CUCME 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene191919 SustainPine v3.0 494
• AutoFact: GTP-binding regulatory protein beta chain homolog-Ch (ISS) n=2 Tax=Ostreococcus RepID=Q00X27_OSTTA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Guanine nucleotide-binding protein subunit beta-like protein 2.555e-18
C-terminus
sp_v3.0_unigene191995 SustainPine v3.0 551
• AutoFact: PREDICTED: WD repeat-containing protein 33 [Equus caballus] 2.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene192555 SustainPine v3.0 548
• AutoFact: 60S ribosomal protein L21 n=1 Tax=Cyanophora paradoxa RepID=RL21_CYAPA 2.00386e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L21 4.034e-10
Complete
sp_v3.0_unigene192582 SustainPine v3.0 493
• AutoFact: PREDICTED: eukaryotic initiation factor 4A-III-like isoform 1 [Apis mellifera] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 2.805e-09
Internal
sp_v3.0_unigene192785 SustainPine v3.0 498
• AutoFact: 60S ribosomal protein L21-A n=3 Tax=Schizosaccharomyces RepID=RL21A_SCHPO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L21 3.353e-10
Complete
sp_v3.0_unigene193438 SustainPine v3.0 489
• AutoFact: putative transducin / WD-40 repeat protein (ISS) [Ostreococcus tauri] emb|CAL52871.1| putative transducin / WD-40 repeat protein (ISS) [Ostreococcus tauri] 1.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene193667 SustainPine v3.0 565
• AutoFact: Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 n=2 Tax=Pucciniales RepID=E3K0E6_PUCGT 5.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Guanine nucleotide-binding protein subunit beta 6.253e-08
C-terminus
sp_v3.0_unigene194289 SustainPine v3.0 513
• AutoFact: PREDICTED: similar to Protein translocase subunit secA, chloroplastic n=1 Tax=Vitis vinifera RepID=UPI0001983A2B 0.0
• FL-Next: sp=Protein translocase subunit SecA, chloroplastic; Spinacia oleracea (Spinach). 0.0
• Sma3: Protein translocase subunit secA 0.0
Internal
sp_v3.0_unigene194651 SustainPine v3.0 284
• AutoFact: RecName: Full=Vacuolar protein sorting-associated protein 41 homolog gb|AAB60857.1| VPS41 [Solanum lycopersicum] 6.0e-23
• FL-Next: sp=Vacuolar protein sorting-associated protein 41 homolog; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
• Sma3: Vacuolar protein sorting-associated protein 41 homolog 4.688e-09
Internal
sp_v3.0_unigene195427 SustainPine v3.0 445
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: WD-repeat protein, putative 5.825e-12
Internal
sp_v3.0_unigene195459 SustainPine v3.0 262
• AutoFact: ubiquitin ligase protein cop1, putative (EC:1.3.1.74); K10143 E3 ubiquitin-protein ligase RFWD2 [EC:6.3.2.19] 4.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin ligase protein cop1, putative 8.451e-11
Internal
sp_v3.0_unigene196026 SustainPine v3.0 194
• AutoFact: Histone H3 methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SRV1_PHYPA 1.0e-16
• FL-Next: tr=Histone H3 methyltransferase complex and RNA cleavage factor II complex, subunit SWD2; Physcomitrella patens subsp. patens (Moss). 0.0
• Sma3: Histone H3 methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 2.643e-09
Internal
sp_v3.0_unigene196224 SustainPine v3.0 546
• AutoFact: coatomer alpha subunit-like protein [Lotus japonicus] 4.0e-10
• FL-Next: sp=Coatomer subunit alpha-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Coatomer subunit alpha-2 1.803e-08
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain