Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: WD40-repeat-containing domain

Term: IPR017986  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene183793 SustainPine v3.0 281
AutoFact: Unassigned protein
FL-Next: Isoform 2 of Enhancer of mRNA-decapping protein 4 OS=Arabidopsis thaliana GN=VCS 0.0
Internal
sp_v3.0_unigene184235 SustainPine v3.0 713
AutoFact: GTP-binding regulatory protein beta chain homolog-Ch (ISS) n=2 Tax=Ostreococcus RepID=Q00X27_OSTTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Guanine nucleotide-binding protein subunit beta-like protein 3.156e-18
C-terminus
sp_v3.0_unigene184781 SustainPine v3.0 116
AutoFact: elongator protein 2 [Arabidopsis thaliana] gb|AEE32440.1| elongator protein 2 [Arabidopsis thaliana] 7.0e-10
FL-Next: sp=Elongator complex protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene185774 SustainPine v3.0 376
AutoFact: [R] COG2319 FOG: WD40 repeat 6.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: F-box and wd40 domain protein, putative 6.72e-14
Internal
sp_v3.0_unigene185782 SustainPine v3.0 679
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene186092 SustainPine v3.0 347
AutoFact: 60s ribosomal protein L21 [Triticum aestivum] 7.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L21 4.372e-10
Putative C-terminus
sp_v3.0_unigene186106 SustainPine v3.0 554
AutoFact: RL21, ribosomal protein 21, 60S large ribosomal subunit n=1 Tax=Thalassiosira pseudonana RepID=B5YNM6_THAPS 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L21 4.034e-10
Complete
sp_v3.0_unigene186335 SustainPine v3.0 530
AutoFact: F-box protein 2 [Arabidopsis thaliana] ref|NP_001190352.1| F-box protein 2 [Arabidopsis thaliana] sp|Q94AD8.1|FBW3_ARATH RecName: Full=F-box/WD-40 repeat-containing protein At5g21040 gb|AAK82516.1| T10F18_70/T10F18_70 [Arabidopsis thaliana] gb|AAO11609.1| 2.0e-12
FL-Next: sp=F-box/WD-40 repeat-containing protein At5g21040; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
sp_v3.0_unigene186517 SustainPine v3.0 451
AutoFact: putative beige protein [Oryza sativa Japonica Group] 4.0e-31
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene187166 SustainPine v3.0 524
AutoFact: Unassigned protein
FL-Next: sp=Protein TOPLESS; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative C-terminus
sp_v3.0_unigene187457 SustainPine v3.0 172
AutoFact: pre-mRNA-processing factor 17 [Arabidopsis thaliana] gb|ABO38749.1| At1g10580 [Arabidopsis thaliana] gb|AEE28597.1| pre-mRNA-processing factor 17 [Arabidopsis thaliana] 1.0e-12
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene188403 SustainPine v3.0 440
AutoFact: PREDICTED: LOW QUALITY PROTEIN: guanine nucleotide-binding protein subunit beta-2-like 1-like n=5 Tax=Amniota RepID=UPI0001D62689 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Guanine nucleotide-binding protein subunit beta-like protein 2.648e-18
Putative C-terminus
sp_v3.0_unigene188976 SustainPine v3.0 421
AutoFact: GTP-binding regulatory protein beta chain homolog-Ch (ISS) n=2 Tax=Ostreococcus RepID=Q00X27_OSTTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Guanine nucleotide-binding protein subunit beta-like protein 2.945e-18
C-terminus
sp_v3.0_unigene189331 SustainPine v3.0 654
AutoFact: Unassigned protein
FL-Next: sp=Topless-related protein 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: WD-repeat protein, putative 2.093e-09
C-terminus
sp_v3.0_unigene189378 SustainPine v3.0 681
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: WD-repeat protein, putative 8.705e-12
C-terminus
sp_v3.0_unigene189466 SustainPine v3.0 669
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
N-terminus
sp_v3.0_unigene189613 SustainPine v3.0 310
AutoFact: Unassigned protein
FL-Next: sp=Topless-related protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene189938 SustainPine v3.0 252
AutoFact: GH15450 n=1 Tax=Drosophila grimshawi RepID=B4J2E2_DROGR 2.0e-21
FL-Next: tr=Eukaryotic translation initiation factor 5A 4; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: eIF-5A-2 7.147e-16
Putative C-terminus
sp_v3.0_unigene190433 SustainPine v3.0 535
AutoFact: 60S ribosomal protein L21-1 n=7 Tax=core eudicotyledons RepID=RL211_ARATH 1.00053e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L21 4.034e-10
Complete
sp_v3.0_unigene190447 SustainPine v3.0 659
AutoFact: Guanine nucleotide-binding protein n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9CG32_9EUKA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Guanine nucleotide-binding protein subunit beta-like protein 2.744e-18
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain