Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: WD40-repeat-containing domain

Term: IPR017986  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene161583 SustainPine v3.0 407
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene161708 SustainPine v3.0 172
AutoFact: putative WD-repeat protein [Arabidopsis thaliana] 5.0e-08
FL-Next: sp=Topless-related protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative C-terminus
sp_v3.0_unigene161718 SustainPine v3.0 183
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein Sb01g019530; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Internal
sp_v3.0_unigene161736 SustainPine v3.0 389
AutoFact: receptor for activated C kinase 1C [Arabidopsis thaliana] sp|Q9LV28.1|GPLPC_ARATH RecName: Full=Guanine nucleotide-binding protein subunit beta-like protein C; AltName: Full=Receptor for activated C kinase 1C dbj|BAB02025.1| guanine nucleotide-binding pro 4.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Guanine nucleotide-binding protein subunit beta-like protein 2.601e-18
Internal
sp_v3.0_unigene161833 SustainPine v3.0 117
AutoFact: pre-mRNA-processing factor 17 [Arabidopsis thaliana] gb|ABO38749.1| At1g10580 [Arabidopsis thaliana] gb|AEE28597.1| pre-mRNA-processing factor 17 [Arabidopsis thaliana] 4.0e-13
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene162058 SustainPine v3.0 256
AutoFact: Unassigned protein
FL-Next: tr=Uncharacterized protein; Oryza glaberrima (African rice). 0.0
Sma3: Os09g0241100 protein 7.797e-06
Internal
sp_v3.0_unigene162624 SustainPine v3.0 191
AutoFact: Protein tipD, putative n=1 Tax=Ricinus communis RepID=B9RAQ4_RICCO 6.0e-06
FL-Next: tr=Nucleotide binding protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Sma3: Protein tipD, putative 5.361e-06
N-terminus
sp_v3.0_unigene162690 SustainPine v3.0 424
AutoFact: Protein translocase subunit secA n=1 Tax=Ricinus communis RepID=B9S2U6_RICCO 0.0
FL-Next: sp=Protein translocase subunit SECA2, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Protein translocase subunit secA 0.0
Internal
sp_v3.0_unigene163155 SustainPine v3.0 266
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
sp_v3.0_unigene163333 SustainPine v3.0 241
AutoFact: Nucleosome remodeling factor, p48 subunit n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RJC1_PHYPA 1.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nucleosome/chromatin assembly factor group 6.675e-10
Internal
sp_v3.0_unigene163686 SustainPine v3.0 141
AutoFact: Nucleosome/chromatin assembly factor group n=7 Tax=core eudicotyledons RepID=A9PHH9_POPTR 1.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: WD-40 repeat-containing protein MSI1 4.755e-09
Internal
sp_v3.0_unigene163734 SustainPine v3.0 168
AutoFact: Cleavage stimulation factor 50 kDa subunit, putative n=1 Tax=Ricinus communis RepID=B9RLL1_RICCO 7.0e-20
FL-Next: tr=Cleavage stimulation factor 50 kDa subunit, putative; Ricinus communis (Castor bean). 0.0
Sma3: Putative cleavage stimulation factor subunit 1 4.061e-09
Internal
sp_v3.0_unigene163792 SustainPine v3.0 399
AutoFact: RVT_1 domain containing protein 1.0e-12
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene164033 SustainPine v3.0 123
AutoFact: Lissencephaly type-1-like homology motif; CTLH, C-terminal to LisH motif; Nitrous oxide reductase, N-terminal; WD40-like; Quinonprotein alcohol dehydrogenase-like n=1 Tax=Medicago truncatula RepID=Q2HW32_MEDTR 1.0e-07
FL-Next: sp=Topless-related protein 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene164095 SustainPine v3.0 148
AutoFact: putative G-protein beta [Gossypium hirsutum] 3.0e-07
FL-Next: tr=Uncharacterized protein; Zea mays (Maize). 0.0
Internal
sp_v3.0_unigene164118 SustainPine v3.0 338
AutoFact: RecName: Full=Eukaryotic initiation factor 4A; Short=eIF-4A; AltName: Full=ATP-dependent RNA helicase eIF4A 7.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: eIF-4A-3 7.595e-08
N-terminus
sp_v3.0_unigene164846 SustainPine v3.0 221
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
sp_v3.0_unigene165013 SustainPine v3.0 307
AutoFact: putative phosphatidylinositol 3-kinase-related protein kinase [Oryza sativa Japonica Group] gb|AAR07071.1| putative phosphatidylinositol 3-kinase-related protein kinase [Oryza sativa Japonica Group] 4.0e-33
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene165179 SustainPine v3.0 143
AutoFact: Nucleotide binding protein, putative n=1 Tax=Ricinus communis RepID=B9S0M7_RICCO 2.0e-19
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Sma3: Nucleotide binding protein 3.559e-07
Internal
sp_v3.0_unigene165276 SustainPine v3.0 264
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain