Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: WD40-repeat-containing domain

Term: IPR017986  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene159030 SustainPine v3.0 524
• AutoFact: RecName: Full=Eukaryotic initiation factor 4A-2; Short=eIF-4A-2; AltName: Full=ATP-dependent RNA helicase eIF4A-2 emb|CAA43513.1| nicotiana eukaryotic translation initiation factor 4A [Nicotiana plumbaginifolia] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 3.389e-09
Internal
sp_v3.0_unigene159037 SustainPine v3.0 413
• AutoFact: coatomer complex subunit [Brachypodium sylvaticum] 7.0e-37
• FL-Next: sp=Coatomer subunit beta'-1; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Coatomer subunit beta'-2 2.737e-08
Internal
sp_v3.0_unigene159133 SustainPine v3.0 384
• AutoFact: Eukaryotic translation initiation factor eIF-5A n=2 Tax=Metarhizium RepID=E9EFI4_METAQ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Eukaryotic translation initiation factor 5A 5.911e-28
N-terminus
sp_v3.0_unigene159152 SustainPine v3.0 357
• AutoFact: Guanine nucleotide-binding protein subunit beta-2-like protein n=1 Tax=Phytophthora infestans T30-4 RepID=D0NC99_PHYIT 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Guanine nucleotide-binding protein subunit beta-like protein 2.696e-18
Internal
sp_v3.0_unigene159222 SustainPine v3.0 443
• AutoFact: cell cycle arrest protein BUB3 [Arabidopsis thaliana] dbj|BAB02543.1| mitotic checkpoint protein [Arabidopsis thaliana] gb|AAM64953.1| mitotic checkpoint protein, putative [Arabidopsis thaliana] gb|AAO42274.1| putative mitotic checkpoint protein [Arabidop 1.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Mitotic checkpoint protein, putative 8.339e-09
Internal
sp_v3.0_unigene159280 SustainPine v3.0 249
• AutoFact: Guanine nucleotide-binding protein subunit beta-2-like protein (Fragment) n=1 Tax=Angiostrongylus cantonensis RepID=F5GTH9_9BILA 1.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Guanine nucleotide-binding protein subunit beta-like protein 1.973e-18
Internal
sp_v3.0_unigene159332 SustainPine v3.0 246
• AutoFact: Glycoside hydrolase, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0MV43_PHYIT 4.0e-24
• FL-Next: tr=Putative uncharacterized protein; Ectocarpus siliculosus (Brown alga). 0.0
Internal
sp_v3.0_unigene159438 SustainPine v3.0 488
• AutoFact: WD and tetratricopeptide repeats protein 1 [Arabidopsis thaliana] emb|CAB96849.1| putative protein [Arabidopsis thaliana] gb|AED91612.1| WD and tetratricopeptide repeats protein 1 [Arabidopsis thaliana] 9.99995e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene159498 SustainPine v3.0 487
• AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] gb|AEE78537.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] 3.0e-18
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene159645 SustainPine v3.0 218
• AutoFact: MSI type nucleosome/chromatin assembly factor C (ISS) n=1 Tax=Ostreococcus tauri RepID=Q00YD9_OSTTA 2.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: WD-40 repeat-containing protein MSI1 6.427e-09
Internal
sp_v3.0_unigene159971 SustainPine v3.0 280
• AutoFact: WD-40 repeat family protein [Musa acuminata] 1.0e-09
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene160058 SustainPine v3.0 499
• AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] gb|AAK50098.1|AF372960_1 AT3g15470/MJK13_13 [Arabidopsis thaliana] gb|AAF35413.1| unknown protein [Arabidopsis thaliana] dbj|BAB02376.1| WD-40 repeat protein-like [Arabidopsis thaliana] gb|A 1.0e-36
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
• Sma3: WD-40 repeat protein-like 3.105e-07
Internal
sp_v3.0_unigene160126 SustainPine v3.0 443
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene160162 SustainPine v3.0 410
• AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] dbj|BAB11582.1| unnamed protein product [Arabidopsis thaliana] gb|AED96466.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] 4.2039e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: WD-repeat protein, putative 3.451e-14
Internal
sp_v3.0_unigene160224 SustainPine v3.0 400
• AutoFact: 60S ribosomal protein L21 n=1 Tax=Cyanophora paradoxa RepID=RL21_CYAPA 2.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L21 4.034e-10
N-terminus
sp_v3.0_unigene161012 SustainPine v3.0 359
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
N-terminus
sp_v3.0_unigene161102 SustainPine v3.0 411
• AutoFact: Unassigned protein
• FL-Next: tr=Uncharacterized protein; Zea mays (Maize). 0.0
Putative C-terminus
sp_v3.0_unigene161276 SustainPine v3.0 452
• AutoFact: Cellulose synthase-like protein D1 n=2 Tax=Oryza sativa RepID=CSLD1_ORYSJ 0.0
• FL-Next: tr=Cellulose synthase catalytic subunit; Pinus taeda (Loblolly pine). 0.0
• Sma3: Cellulose synthase 0.0
Internal
sp_v3.0_unigene161436 SustainPine v3.0 480
• AutoFact: Probable HYP2-translation initiation factor eIF5A.1 n=2 Tax=Ustilaginaceae RepID=E6ZVD8_9BASI 0.0
• FL-Next: tr=Eukaryotic translation initiation factor 5A 4; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Eukaryotic translation initiation factor 5A 6.811e-28
Putative Complete
sp_v3.0_unigene161550 SustainPine v3.0 388
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: WD-repeat protein, putative 8.476e-06
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain