Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: WD40-repeat-containing domain

Term: IPR017986  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene156377 SustainPine v3.0 425
• AutoFact: Ribosomal protein L21e n=1 Tax=Sphaerius sp. APV-2005 RepID=Q4GXF5_9COLE 5.99756e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L21 4.034e-10
N-terminus
sp_v3.0_unigene156437 SustainPine v3.0 453
• AutoFact: GTP-binding regulatory protein beta chain homolog-Ch (ISS) [Ostreococcus tauri] emb|CAL56484.1| GTP-binding regulatory protein beta chain homolog-Ch (ISS) [Ostreococcus tauri] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Guanine nucleotide-binding protein subunit beta-like protein 2.555e-18
C-terminus
sp_v3.0_unigene156598 SustainPine v3.0 358
• AutoFact: Peptidyl-prolyl cis-trans isomerase n=2 Tax=Oikopleura dioica RepID=E4YT26_OIKDI 0.0
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
N-terminus
sp_v3.0_unigene156616 SustainPine v3.0 450
• AutoFact: Guanine nucleotide binding protein beta subunit-like protein n=1 Tax=Thalassiosira pseudonana RepID=B8BQ72_THAPS 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Guanine nucleotide-binding protein subunit beta-like protein 3.156e-18
Internal
sp_v3.0_unigene156845 SustainPine v3.0 408
• AutoFact: Flagellar associated protein n=1 Tax=Chlamydomonas reinhardtii RepID=A8ILK1_CHLRE 8.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene156925 SustainPine v3.0 313
• AutoFact: Guanine nucleotide-binding protein subunit beta-2-like protein n=1 Tax=Phytophthora infestans T30-4 RepID=D0NC99_PHYIT 3.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene157032 SustainPine v3.0 494
• AutoFact: heterotrimeric guanine nucleotide-binding protein beta subunit [Bombyx mori] gb|ABF51460.1| heterotrimeric guanine nucleotide-binding protein beta subunit [Bombyx mori] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Guanine nucleotide-binding protein subunit beta 3.28e-11
Putative C-terminus
sp_v3.0_unigene157108 SustainPine v3.0 384
• AutoFact: 60S ribosomal protein L21-1 n=1 Tax=Phytophthora infestans T30-4 RepID=D0MS26_PHYIT 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L21 7.152e-14
N-terminus
sp_v3.0_unigene157120 SustainPine v3.0 334
• AutoFact: pfam00400, WD40, WD domain, G-beta repeat 5.0e-07
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
sp_v3.0_unigene157323 SustainPine v3.0 504
• AutoFact: Herpes_gp2 multi-domain protein 2.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene157325 SustainPine v3.0 526
• AutoFact: Novel protein (Zgc:86860) n=2 Tax=Danio rerio RepID=A5WUR0_DANRE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene157355 SustainPine v3.0 270
• AutoFact: Coronin n=1 Tax=Physarum polycephalum RepID=Q5R226_PHYPO 7.0e-23
• FL-Next: tr=Putative uncharacterized protein; Ectocarpus siliculosus (Brown alga). 0.0
Internal
sp_v3.0_unigene157425 SustainPine v3.0 448
• AutoFact: eukaryotic initiation factor 4A-III [Danio rerio] sp|Q7ZVA6.1|IF4A3_DANRE RecName: Full=Eukaryotic initiation factor 4A-III; Short=eIF-4A-III; Short=eIF4A-III; AltName: Full=ATP-dependent RNA helicase DDX48; AltName: Full=ATP-dependent RNA helicase eIF4A- 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 2.053e-09
C-terminus
sp_v3.0_unigene157434 SustainPine v3.0 183
• AutoFact: PREDICTED: similar to Lipoxygenase homology domain-containing protein 1 n=1 Tax=Ciona intestinalis RepID=UPI000180C1F2 4.0e-11
• FL-Next: tr=Putative uncharacterized protein mot51; Volvox carteri (Green alga). 0.0
Internal
sp_v3.0_unigene157472 SustainPine v3.0 316
• AutoFact: G-protein beta subunit n=2 Tax=Rhizoctonia solani RepID=A9QVE2_THACU 4.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Guanine nucleotide-binding protein subunit beta 8.068e-08
Internal
sp_v3.0_unigene157506 SustainPine v3.0 379
• AutoFact: PREDICTED: WD repeat-containing protein 5-like n=1 Tax=Nomascus leucogenys RepID=UPI00020AE909 3.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene157558 SustainPine v3.0 334
• AutoFact: G-protein beta subunit n=2 Tax=Rhizoctonia solani RepID=A9QVE2_THACU 5.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Guanine nucleotide-binding protein subunit beta 1.442e-11
Internal
sp_v3.0_unigene157559 SustainPine v3.0 413
• AutoFact: WD repeat domain 61 n=1 Tax=Bombyx mori RepID=Q1HQ69_BOMMO 7.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene157574 SustainPine v3.0 511
• AutoFact: Guanine nucleotide-binding protein subunit beta-like protein n=5 Tax=Chlamydomonadales RepID=GBLP_CHLRE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Guanine nucleotide-binding protein subunit beta-like protein 2.555e-18
C-terminus
sp_v3.0_unigene157595 SustainPine v3.0 567
• AutoFact: PREDICTED: LOW QUALITY PROTEIN: guanine nucleotide-binding protein subunit beta-2-like 1-like n=5 Tax=Amniota RepID=UPI0001D62689 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Guanine nucleotide-binding protein subunit beta-like protein 3.156e-18
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain