Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: WD40-repeat-containing domain

Term: IPR017986  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene155041 SustainPine v3.0 461
• AutoFact: putative transducin / WD-40 repeat protein (ISS) [Ostreococcus tauri] emb|CAL52871.1| putative transducin / WD-40 repeat protein (ISS) [Ostreococcus tauri] 5.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative transducin / WD-40 repeat protein (ISS) 7.797e-06
Internal
sp_v3.0_unigene155046 SustainPine v3.0 420
• AutoFact: Peptidyl-prolyl cis-trans isomerase n=1 Tax=Phytophthora infestans T30-4 RepID=D0N5X3_PHYIT 1.0e-23
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase 2.554e-35
N-terminus
sp_v3.0_unigene155069 SustainPine v3.0 145
• AutoFact: Eukaryotic translation initiation factor eIF-5A n=4 Tax=Trichocomaceae RepID=B6QKQ7_PENMQ 3.0e-10
• FL-Next: tr=Eukaryotic translation initiation factor 5A; Picea abies (Norway spruce) (Picea excelsa). 0.0
Internal
sp_v3.0_unigene155186 SustainPine v3.0 492
• AutoFact: Pleiotropic regulator 1 n=1 Tax=Ascaris suum RepID=F1L344_ASCSU 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: PP1/PP2A phosphatases pleiotropic regulator PRL1 5.308e-09
Internal
sp_v3.0_unigene155197 SustainPine v3.0 553
• AutoFact: Peroxisomal biogenesis factor 7 n=3 Tax=Danio rerio RepID=A8KBW8_DANRE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Peroxisomal targeting signal 2 receptor 2.543e-13
Internal
sp_v3.0_unigene155229 SustainPine v3.0 507
• AutoFact: Cyclophilin, putative n=4 Tax=Plasmodium RepID=A5K4H5_PLAVS 0.0
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
C-terminus
sp_v3.0_unigene155336 SustainPine v3.0 439
• AutoFact: Translation initiation factor eIF-5A family protein n=1 Tax=Tetrahymena thermophila SB210 RepID=Q23BQ5_TETTH 5.99756e-43
• FL-Next: tr=Eukaryotic translation initiation factor 5A; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Eukaryotic translation initiation factor 5A 7.476e-28
N-terminus
sp_v3.0_unigene155454 SustainPine v3.0 142
• AutoFact: Sec13 protein n=1 Tax=Naegleria gruberi RepID=D2V6F0_NAEGR 2.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene155574 SustainPine v3.0 341
• AutoFact: PREDICTED: eukaryotic translation initiation factor 4A-like n=1 Tax=Saccoglossus kowalevskii RepID=UPI0001CBC21A 9.80909e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 1.736e-11
C-terminus
sp_v3.0_unigene155591 SustainPine v3.0 481
• AutoFact: Actin binding protein n=1 Tax=Dictyostelium purpureum RepID=F0ZVC2_DICPU 0.0
• FL-Next: tr=Putative uncharacterized protein; Ectocarpus siliculosus (Brown alga). 0.0
Putative C-terminus
sp_v3.0_unigene155644 SustainPine v3.0 417
• AutoFact: Coronin n=1 Tax=Naegleria gruberi RepID=D2VLM1_NAEGR 4.2039e-45
• FL-Next: tr=Putative uncharacterized protein; Ectocarpus siliculosus (Brown alga). 0.0
Internal
sp_v3.0_unigene155666 SustainPine v3.0 353
• AutoFact: Peroxisomal targeting signal 2 receptor n=2 Tax=Dictyostelium RepID=PEX7_DICDI 3.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Peroxisomal targeting signal type 2 receptor 4.479e-13
Internal
sp_v3.0_unigene155682 SustainPine v3.0 399
• AutoFact: Guanine nucleotide-binding protein subunit beta n=4 Tax=Dictyosteliida RepID=GBB_DICDI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Guanine nucleotide-binding protein subunit beta 2.779e-11
C-terminus
sp_v3.0_unigene155813 SustainPine v3.0 377
• AutoFact: WD40 repeat-containing protein n=1 Tax=Dictyostelium fasciculatum RepID=F4PV07_9MYCE 1.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene155927 SustainPine v3.0 474
• AutoFact: Activated protein kinase C receptor RACK1-rat, putative n=3 Tax=Chromadorea RepID=A8Q1C2_BRUMA 8.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Guanine nucleotide-binding protein subunit beta-like protein 2.673e-19
C-terminus
sp_v3.0_unigene156028 SustainPine v3.0 557
• AutoFact: Coronin-like protein, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0MTM0_PHYIT 0.0
• FL-Next: tr=Coronin-like protein, putative; Phytophthora infestans (strain T30-4) (Potato late blight fungus). 0.0
Internal
sp_v3.0_unigene156067 SustainPine v3.0 343
• AutoFact: Coronin-like protein, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0MTM0_PHYIT 5.0e-32
• FL-Next: tr=Putative uncharacterized protein; Ectocarpus siliculosus (Brown alga). 0.0
Internal
sp_v3.0_unigene156104 SustainPine v3.0 604
• AutoFact: ATP-dependent RNA helicase eIF4A n=2 Tax=Ustilaginaceae RepID=IF4A_USTMA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 2.316e-09
C-terminus
sp_v3.0_unigene156214 SustainPine v3.0 495
• AutoFact: Initiation factor 5a n=1 Tax=Flammulina velutipes RepID=D2JY86_FLAVE 0.0
• FL-Next: tr=Eukaryotic translation initiation factor 5A; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Eukaryotic translation initiation factor 5A 5.911e-28
N-terminus
sp_v3.0_unigene156342 SustainPine v3.0 522
• AutoFact: 60S ribosomal protein L21 n=1 Tax=Cyanophora paradoxa RepID=RL21_CYAPA 2.00386e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L21 4.034e-10
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain