Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: WD40-repeat-containing domain

Term: IPR017986  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene153714 SustainPine v3.0 418
AutoFact: ATP-dependent protease ATP-binding subunit HslU-like protein n=1 Tax=Paenibacillus larvae subsp. larvae B-3650 RepID=E7M5D0_9BACL 6.0e-28
FL-Next: sp=Chaperone protein ClpB3, mitochondrial; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene153769 SustainPine v3.0 533
AutoFact: WD repeat-containing protein 61 [Danio rerio] sp|Q6P5M2.1|WDR61_DANRE RecName: Full=WD repeat-containing protein 61 gb|AAH62834.1| Zgc:77675 [Danio rerio] 5.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene153963 SustainPine v3.0 325
AutoFact: Peptidyl-prolyl cis-trans isomerase n=1 Tax=Chlamydomonas reinhardtii RepID=A8JGI0_CHLRE 4.0e-31
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
C-terminus
sp_v3.0_unigene153988 SustainPine v3.0 458
AutoFact: Mating factor receptor-coupled G protein, putative n=4 Tax=Filobasidiella/Cryptococcus neoformans species complex RepID=E6R4F6_CRYGW 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Guanine nucleotide-binding protein subunit beta 1.824e-11
Putative C-terminus
sp_v3.0_unigene154268 SustainPine v3.0 344
AutoFact: WD40 repeat protein [Ipomoea purpurea] dbj|BAE94399.1| WD40 repeat protein [Ipomoea nil] 5.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: WD40 repeat protein 1.054e-09
C-terminus
sp_v3.0_unigene154272 SustainPine v3.0 353
AutoFact: Guanine nucleotide-binding protein subunit beta-like protein n=5 Tax=Chlamydomonadales RepID=GBLP_CHLRE 1.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Guanine nucleotide-binding protein subunit beta-like protein 2.555e-18
C-terminus
sp_v3.0_unigene154278 SustainPine v3.0 242
AutoFact: 60S ribosomal protein L21 (Fragment) n=1 Tax=Echinorhynchus truttae RepID=B7FDN5_9BILA 6.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene154384 SustainPine v3.0 466
AutoFact: PREDICTED: similar to Intraflagellar transport 80 homolog (Chlamydomonas) [Strongylocentrotus purpuratus] ref|XP_001193975.1| PREDICTED: similar to Intraflagellar transport 80 homolog (Chlamydomonas) [Strongylocentrotus purpuratus] 1.0e-35
FL-Next: tr=Intraflagellar transport particle protein 80; Chlamydomonas reinhardtii (Chlamydomonas smithii). 0.0
Sma3: Intraflagellar transport protein 80 2.275e-15
C-terminus
sp_v3.0_unigene154437 SustainPine v3.0 508
AutoFact: DEAD box ATP-dependent RNA helicase n=1 Tax=Culex quinquefasciatus RepID=B0XJH6_CULQU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dead box ATP-dependent RNA helicase, putative 1.058e-11
C-terminus
sp_v3.0_unigene154467 SustainPine v3.0 451
AutoFact: Eukaryotic translation initiation factor 3 subunit 2 beta n=1 Tax=Glossina morsitans morsitans RepID=D3TRV5_GLOMM 7.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene154487 SustainPine v3.0 204
AutoFact: Guanine nucleotide binding protein beta subunit-like protein n=1 Tax=Thalassiosira pseudonana RepID=B8BQ72_THAPS 5.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Guanine nucleotide-binding protein subunit beta-like protein 2.945e-18
Internal
sp_v3.0_unigene154663 SustainPine v3.0 548
AutoFact: Poly(A)+ RNA export protein [Coprinopsis cinerea okayama7#130] gb|EAU85430.1| Poly(A)+ RNA export protein [Coprinopsis cinerea okayama7#130] 7.00649e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Rae1-like protein 4.107e-09
Internal
sp_v3.0_unigene154709 SustainPine v3.0 199
AutoFact: 60S ribosomal protein L21e, putative n=2 Tax=Theileria RepID=Q4N648_THEPA 5.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L21 1.594e-10
N-terminus
sp_v3.0_unigene154711 SustainPine v3.0 473
AutoFact: 60S ribosomal protein L21, putative n=1 Tax=Pediculus humanus corporis RepID=E0VDP2_PEDHC 7.00649e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L21 2.506e-10
N-terminus
sp_v3.0_unigene154745 SustainPine v3.0 328
AutoFact: transducin family protein / WD-40 repeat family protein (ISS) [Ostreococcus tauri] emb|CAL53447.1| transducin family protein / WD-40 repeat family protein (ISS) [Ostreococcus tauri] 1.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Rae1-like protein 2.066e-10
C-terminus
sp_v3.0_unigene154791 SustainPine v3.0 247
AutoFact: Eukaryotic translation initiation factor 5A-1 n=20 Tax=Saccharomycetaceae RepID=IF5A1_YEAST 1.0e-21
FL-Next: tr=Eukaryotic translation initiation factor 5A 2; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: eIF-5A-2 4.017e-16
Putative C-terminus
sp_v3.0_unigene154878 SustainPine v3.0 447
AutoFact: Translation initiation factor 5A n=1 Tax=Glossina morsitans morsitans RepID=D3TMH0_GLOMM 0.0
FL-Next: tr=Eukaryotic translation initiation factor 5A 2; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Eukaryotic translation initiation factor 5A 4.491e-28
N-terminus
sp_v3.0_unigene154910 SustainPine v3.0 522
AutoFact: 60s ribosomal protein L21 [Triticum aestivum] 6.99949e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L21 3.652e-10
Complete
sp_v3.0_unigene154949 SustainPine v3.0 425
AutoFact: Eukaryotic translation initiation factor eIF-5A n=1 Tax=Neosartorya fischeri NRRL 181 RepID=A1D4L5_NEOFI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Eukaryotic translation initiation factor 5A 6.811e-28
N-terminus
sp_v3.0_unigene154962 SustainPine v3.0 333
AutoFact: Guanine nucleotidebinding protein subunit beta2like protein putative n=1 Tax=Albugo laibachii Nc14 RepID=F0WY68_9STRA 4.99983e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Guanine nucleotide-binding protein subunit beta-like protein 2.945e-18
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain