Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: WD40-repeat-containing domain

Term: IPR017986  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene150198 SustainPine v3.0 216
• AutoFact: G protein beta-subunit-like protein (Fragment) n=2 Tax=Nicotiana tabacum RepID=A2V880_TOBAC 1.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Guanine nucleotide-binding protein subunit beta-like protein 2.555e-18
Internal
sp_v3.0_unigene150273 SustainPine v3.0 479
• AutoFact: WD40 repeat-containing protein n=1 Tax=Dictyostelium discoideum RepID=Q55E90_DICDI 8.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene150391 SustainPine v3.0 357
• AutoFact: PREDICTED: similar to Eukaryotic initiation factor 4A-II n=1 Tax=Hydra magnipapillata RepID=UPI0001925CB9 2.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 1.384e-09
C-terminus
sp_v3.0_unigene150466 SustainPine v3.0 294
• AutoFact: F-box-like/WD repeat-containing protein TBL1X [Bos taurus] gb|ACJ61274.1| transducin beta-like 1 [Bos taurus] gb|DAA12528.1| transducin (beta)-like 1X-linked [Bos taurus] 3.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene150506 SustainPine v3.0 347
• AutoFact: WD repeat-containing protein YCR072C [Aspergillus oryzae RIB40] dbj|BAE55902.1| unnamed protein product [Aspergillus oryzae RIB40] 1.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Wd-40 repeat family protein/notchless protein 6.663e-09
Complete
sp_v3.0_unigene150641 SustainPine v3.0 319
• AutoFact: Ribosome biogenesis protein bop1 n=2 Tax=Danio rerio RepID=BOP1_DANRE 5.99756e-43
• FL-Next: sp=Ribosome biogenesis protein BOP1 homolog; Chlamydomonas reinhardtii (Chlamydomonas smithii). 0.0
• Sma3: Putative WD-40 repeat protein 7.233e-07
Internal
sp_v3.0_unigene150944 SustainPine v3.0 438
• AutoFact: PREDICTED: similar to Eukaryotic initiation factor 4A-II n=1 Tax=Hydra magnipapillata RepID=UPI0001925CB9 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 4.553e-14
C-terminus
sp_v3.0_unigene151146 SustainPine v3.0 282
• AutoFact: WD40 repeat-containing protein n=1 Tax=Dictyostelium fasciculatum RepID=F4PJG5_9MYCE 5.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Wd-40 repeat family protein/notchless protein 6.663e-09
Putative Complete
sp_v3.0_unigene151220 SustainPine v3.0 532
• AutoFact: 66 kDa stress protein n=1 Tax=Physarum polycephalum RepID=WD66_PHYPO 1.96182e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative stress protein 5.361e-06
Internal
sp_v3.0_unigene151451 SustainPine v3.0 358
• AutoFact: Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 n=2 Tax=Pucciniales RepID=E3K0E6_PUCGT 1.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Guanine nucleotide-binding protein subunit beta 1.262e-11
C-terminus
sp_v3.0_unigene151468 SustainPine v3.0 272
• AutoFact: will die slowly [Drosophila melanogaster] ref|XP_002040526.1| GM19230 [Drosophila sechellia] ref|XP_002106002.1| GD16610 [Drosophila simulans] sp|Q9V3J8.1|WDS_DROME RecName: Full=Protein will die slowly gb|AAF43418.1|AF233288_1 WDS [Drosophila melanogaste 2.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative WD-40 repeat-protein 5.361e-06
Internal
sp_v3.0_unigene151505 SustainPine v3.0 499
• AutoFact: Eukaryotic translation initiation factor 5A n=3 Tax=Picea RepID=Q3ZDK6_PICAB 4.0e-35
• FL-Next: tr=Eukaryotic translation initiation factor 5A; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Eukaryotic translation initiation factor 5A 2.288e-20
Putative Complete
sp_v3.0_unigene151703 SustainPine v3.0 398
• AutoFact: Guanine nucleotide-binding protein subunit beta-2-like protein n=1 Tax=Phytophthora infestans T30-4 RepID=D0NC99_PHYIT 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Guanine nucleotide-binding protein subunit beta-like protein 2.945e-18
Internal
sp_v3.0_unigene151717 SustainPine v3.0 227
• AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9SSV2_RICCO 3.0e-28
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
Putative C-terminus
sp_v3.0_unigene152028 SustainPine v3.0 353
• AutoFact: PREDICTED: similar to SEC13-like 1 (S. cerevisiae) n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000589100 2.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene152127 SustainPine v3.0 161
• AutoFact: Flagellar associated protein n=1 Tax=Chlamydomonas reinhardtii RepID=A8ILK1_CHLRE 4.0e-14
• FL-Next: sp=Coatomer subunit alpha-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene152193 SustainPine v3.0 327
• AutoFact: wd-repeat protein [Aedes aegypti] ref|XP_001661732.1| wd-repeat protein [Aedes aegypti] gb|EAT32620.1| wd-repeat protein [Aedes aegypti] gb|EAT36374.1| wd-repeat protein [Aedes aegypti] 1.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene152208 SustainPine v3.0 377
• AutoFact: PP1/PP2A phosphatases pleiotropic regulator PRL1, putative n=1 Tax=Ricinus communis RepID=B9RT69_RICCO 4.0e-37
• FL-Next: tr=Uncharacterized protein; Zea mays (Maize). 0.0
• Sma3: PP1/PP2A phosphatases pleiotropic regulator PRL1 5.308e-09
Complete
sp_v3.0_unigene152377 SustainPine v3.0 525
• AutoFact: PREDICTED: similar to retinoblastoma-binding protein 4 (rbbp4) [Nasonia vitripennis] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nucleosome/chromatin assembly factor group 2.08e-09
C-terminus
sp_v3.0_unigene152549 SustainPine v3.0 284
• AutoFact: Eukaryotic translation initiation factor 5A n=1 Tax=Postia placenta Mad-698-R RepID=B8PCC0_POSPM 3.0e-39
• FL-Next: tr=Eukaryotic translation initiation factor 5A; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Eukaryotic translation initiation factor 5A 6.006e-28
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain