Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: WD40-repeat-containing domain

Term: IPR017986  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene146868 SustainPine v3.0 520
• AutoFact: protein TOPLESS [Arabidopsis thaliana] ref|NP_849672.1| protein TOPLESS [Arabidopsis thaliana] ref|NP_001031050.1| protein TOPLESS [Arabidopsis thaliana] ref|NP_001031051.1| protein TOPLESS [Arabidopsis thaliana] sp|Q94AI7.1|TPL_ARATH RecName: Full=Protei 2.0e-09
• FL-Next: sp=Protein TOPLESS; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative C-terminus
sp_v3.0_unigene146877 SustainPine v3.0 328
• AutoFact: Unassigned protein
• FL-Next: sp=Topless-related protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene146880 SustainPine v3.0 744
• AutoFact: Topless-related protein 2 n=2 Tax=Arabidopsis RepID=TPR2_ARATH 5.0e-40
• FL-Next: sp=Topless-related protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: WD-repeat protein, putative 3.297e-07
Internal
sp_v3.0_unigene146902 SustainPine v3.0 502
• AutoFact: Unassigned protein
• FL-Next: Isoform 1 of Topless-related protein 1 OS=Arabidopsis thaliana GN=TPR1 0.0
• Sma3: WD-repeat protein, putative 6.02e-12
Internal
sp_v3.0_unigene146905 SustainPine v3.0 292
• AutoFact: WD-40 repeat protein-like n=7 Tax=Poaceae RepID=Q7EYE2_ORYSJ 2.0e-13
• FL-Next: sp=Protein TOPLESS; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene146920 SustainPine v3.0 448
• AutoFact: WD-40 repeat protein-like [Oryza sativa Japonica Group] gb|EAZ41606.1| hypothetical protein OsJ_26138 [Oryza sativa Japonica Group] 6.0e-23
• FL-Next: sp=Protein TOPLESS; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: WD-repeat protein, putative 1.882e-09
Internal
sp_v3.0_unigene146952 SustainPine v3.0 282
• AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9SMF9_RICCO 7.0e-12
• FL-Next: sp=Topless-related protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: WD-repeat protein, putative 1.292e-09
Internal
sp_v3.0_unigene147957 SustainPine v3.0 318
• AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] gb|AAK50098.1|AF372960_1 AT3g15470/MJK13_13 [Arabidopsis thaliana] gb|AAF35413.1| unknown protein [Arabidopsis thaliana] dbj|BAB02376.1| WD-40 repeat protein-like [Arabidopsis thaliana] gb|A 8.0e-30
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: WD-repeat protein, putative 3.947e-12
Internal
sp_v3.0_unigene148141 SustainPine v3.0 264
• AutoFact: Sucrose_synth domain containing protein 4.0e-12
• FL-Next: tr=Sucrose synthase; Pinus taeda (Loblolly pine). 0.0
Internal
sp_v3.0_unigene148159 SustainPine v3.0 262
• AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] gb|AAD56324.1|AC009326_11 hypothetical protein [Arabidopsis thaliana] gb|AEE74717.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] 0.0001
• FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Internal
sp_v3.0_unigene148230 SustainPine v3.0 228
• AutoFact: Topless-related 2 protein [Arabidopsis thaliana] sp|Q9LRZ0.2|TPR2_ARATH RecName: Full=Topless-related protein 2 gb|AEE75871.1| Topless-related 2 protein [Arabidopsis thaliana] 4.0e-13
• FL-Next: sp=Topless-related protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene148552 SustainPine v3.0 477
• AutoFact: pentatricopeptide (PPR) repeat-containing protein-like protein [Oryza sativa Japonica Group] dbj|BAD30928.1| pentatricopeptide (PPR) repeat-containing protein-like protein [Oryza sativa Japonica Group] 9.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 2.472e-35
Putative N-terminus
sp_v3.0_unigene148636 SustainPine v3.0 319
• AutoFact: pre-mRNA-processing factor 17 [Arabidopsis thaliana] gb|ABO38749.1| At1g10580 [Arabidopsis thaliana] gb|AEE28597.1| pre-mRNA-processing factor 17 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene148637 SustainPine v3.0 513
• AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9RPC6_RICCO 4.0e-30
• FL-Next: sp=Transcriptional corepressor LEUNIG; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene149471 SustainPine v3.0 250
• AutoFact: Cellulose synthase catalytic subunit n=1 Tax=Pinus taeda RepID=Q5DI94_PINTA 2.0e-08
• FL-Next: tr=Cellulose synthase catalytic subunit; Pinus taeda (Loblolly pine). 0.0
• Sma3: Cellulose synthase 9.004e-40
Internal
sp_v3.0_unigene149571 SustainPine v3.0 203
• AutoFact: Unassigned protein
• FL-Next: tr=Uncharacterized protein; Brachypodium distachyon (Purple false brome) (Trachynia distachya). 0.0
• Sma3: Putative uncharacterized protein OJ1789_C07.22 9.747e-06
Internal
sp_v3.0_unigene149578 SustainPine v3.0 137
• AutoFact: WD40 domain containing protein 8.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene149598 SustainPine v3.0 191
• AutoFact: Anaphase promoting complex protein n=1 Tax=Micromonas sp. RCC299 RepID=C1E6Q7_MICSR 3.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative cdc20 protein 9.259e-08
Internal
sp_v3.0_unigene149641 SustainPine v3.0 380
• AutoFact: F-box and wd40 domain protein, putative (EC:2.7.11.7) 7.0e-28
• FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
N-terminus
sp_v3.0_unigene150022 SustainPine v3.0 345
• AutoFact: Neurobeachin, putative n=1 Tax=Ricinus communis RepID=B9RZY6_RICCO 3.0e-25
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain