Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: WD40-repeat-containing domain

Term: IPR017986  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene27525 SustainPine v3.0 829
AutoFact: DUF3593 domain containing protein 1.0e-38
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
N-terminus
sp_v3.0_unigene28033 SustainPine v3.0 2366
AutoFact: peptidyl-prolyl cis-trans isomerase SDCCAG10 [Arabidopsis thaliana] gb|AAS75308.1| multidomain cyclophilin type peptidyl-prolyl cis-trans isomerase [Arabidopsis thaliana] gb|ABF57285.1| At4g33060 [Arabidopsis thaliana] gb|AEE86168.1| peptidyl-prolyl cis-t 0.0
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
Complete
sp_v3.0_unigene28114 SustainPine v3.0 1726
AutoFact: phosphorylase family protein [Arabidopsis thaliana] dbj|BAC43650.1| unknown protein [Arabidopsis thaliana] gb|AAO63378.1| At4g24340 [Arabidopsis thaliana] gb|AEE84891.1| phosphorylase family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Mta/sah nucleosidase, putative 1.797e-11
Complete
sp_v3.0_unigene28118 SustainPine v3.0 601
AutoFact: Probable 60s ribosomal protein L21-A n=2 Tax=Ustilaginaceae RepID=E6ZV43_9BASI 3.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L21 4.034e-10
Complete
sp_v3.0_unigene28246 SustainPine v3.0 2391
AutoFact: Unassigned protein
FL-Next: sp=U3 small nucleolar RNA-associated protein 18 homolog; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v3.0_unigene28300 SustainPine v3.0 1100
AutoFact: Lissencephaly type-1-like homology motif; CTLH, C-terminal to LisH motif; Nitrous oxide reductase, N-terminal; WD40-like; Quinonprotein alcohol dehydrogenase-like [Medicago truncatula] 0.0
FL-Next: sp=Topless-related protein 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: WD-repeat protein, putative 7.856e-12
C-terminus
sp_v3.0_unigene28633 SustainPine v3.0 554
AutoFact: protein FIZZY-related 1 [Arabidopsis thaliana] sp|Q8VZS9.1|FZR1_ARATH RecName: Full=Protein FIZZY-RELATED 1; AltName: Full=Cell cycle switch protein CCS52A2 gb|AAL36231.1| putative Srw1 protein [Arabidopsis thaliana] gb|AAM14174.1| putative Srw1 protein [ 1.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene28699 SustainPine v3.0 2423
AutoFact: Metallothio multi-domain protein 1.0e-08
FL-Next: tr=Arabinogalactan-like protein; Pinus taeda (Loblolly pine). 0.0
Putative Complete
sp_v3.0_unigene28702 SustainPine v3.0 275
AutoFact: cinnamoyl-CoA reductase-like protein [Arabidopsis thaliana] 1.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cinnamoyl-CoA reductase, putative 1.259e-09
Internal
sp_v3.0_unigene28814 SustainPine v3.0 1682
AutoFact: drought-sensitive 1 protein [Arabidopsis thaliana] gb|AAF14658.1|AC011713_6 Contains similarity to gb|AF092102 G-protein beta subunit git5p from Schizosaccharomyces pombe and contains 2 PF|00400WD domain, G-beta repeat domains [Arabidopsis thaliana] gb|AE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene28921 SustainPine v3.0 424
AutoFact: Protein translocase subunit secA n=3 Tax=Oryza sativa Japonica Group RepID=Q0IU29_ORYSJ 0.0
FL-Next: Isoform 2 of Protein translocase subunit SECA2, chloroplastic OS=Arabidopsis thaliana GN=SECA2 0.0
Sma3: Protein translocase subunit secA 0.0
Internal
sp_v3.0_unigene29231 SustainPine v3.0 578
AutoFact: Unassigned protein
coding
sp_v3.0_unigene29373 SustainPine v3.0 3403
AutoFact: embryo sac development arrest 7 protein [Arabidopsis thaliana] emb|CAB72169.1| putative protein [Arabidopsis thaliana] gb|AAL47467.1| AT3g56990/F24I3_70 [Arabidopsis thaliana] gb|AEE79596.1| embryo sac development arrest 7 protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Complete
sp_v3.0_unigene29376 SustainPine v3.0 627
AutoFact: Protein translocase subunit secA (Fragment) n=2 Tax=Vitis vinifera RepID=E0CR18_VITVI 1.0e-38
FL-Next: Isoform 2 of Protein translocase subunit SECA2, chloroplastic OS=Arabidopsis thaliana GN=SECA2 0.0
Sma3: Protein translocase subunit secA 2.239e-16
C-terminus
sp_v3.0_unigene29795 SustainPine v3.0 2195
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] ref|NP_001189878.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] gb|AAK82560.1| AT3g13340/MDC11_13 [Arabidopsis thaliana] gb|AAM98109.1| At3g13340/MDC11_13 [Arabidopsis t 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: WD-repeat protein-like 2.809e-13
Complete
sp_v3.0_unigene30166 SustainPine v3.0 1690
AutoFact: WD-repeat protein GhTTG2 [Gossypium hirsutum] gb|AAM95644.1| WD-repeat protein GhTTG2 [Gossypium hirsutum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene30589 SustainPine v3.0 2086
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] gb|AAK92820.1| unknown protein [Arabidopsis thaliana] gb|AAL08286.1| AT4g18900/F13C5_70 [Arabidopsis thaliana] gb|AAM44990.1| unknown protein [Arabidopsis thaliana] gb|AEE84104.1| transducin 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Periodic tryptophan protein 1 4.49e-09
Complete
sp_v3.0_unigene30986 SustainPine v3.0 597
AutoFact: Ribosomal protein L21 n=1 Tax=Lepidochitona cinerea RepID=E3P7F3_9MOLL 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L21 5.947e-07
Complete
sp_v3.0_unigene31038 SustainPine v3.0 664
AutoFact: Eukaryotic translation initiation factor 5A n=2 Tax=Caligus RepID=C1BMM4_9MAXI 0.0
FL-Next: tr=Eukaryotic translation initiation factor 5A 4; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Eukaryotic translation initiation factor 5A 3.437e-28
Complete
sp_v3.0_unigene31200 SustainPine v3.0 583
AutoFact: 60S ribosomal protein L21-1 n=1 Tax=Phytophthora infestans T30-4 RepID=D0MS26_PHYIT 2.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L21 3.777e-10
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain