Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: WD40 repeat, conserved site

Term: IPR019775  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene10372 SustainPine v3.0 2128
AutoFact: 3-ketoacyl-CoA synthase n=1 Tax=Picea sitchensis RepID=D5A9Z6_PICSI 0.0
FL-Next: sp=3-ketoacyl-CoA synthase 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Acyltransferase, putative 7.51e-34
Complete
sp_v3.0_unigene10383 SustainPine v3.0 1016
AutoFact: Niemann-Pick C1 protein [Arabidopsis thaliana] gb|AEE31919.1| Niemann-Pick C1 protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Sma3: Cholesterol transport protein 3.114e-09
Internal
sp_v3.0_unigene10391 SustainPine v3.0 1091
AutoFact: Pyridoxal phosphate-dependent transferase domain-containing protein [Arabidopsis thaliana] gb|AAG12531.1|AC015446_12 Similar to Allinase [Arabidopsis thaliana] gb|AEE31667.1| Pyridoxal phosphate-dependent transferase domain-containing protein [Arabidopsis 0.0
FL-Next: sp=Tryptophan aminotransferase-related protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Chromosome undetermined scaffold_213, whole genome shotgun sequence 2.236e-19
C-terminus
sp_v3.0_unigene10392 SustainPine v3.0 2492
AutoFact: O-fucosyltransferase-like protein [Arabidopsis thaliana] gb|AAK25969.1|AF360259_1 putative axi 1 protein from Nicotiana tabacum [Arabidopsis thaliana] gb|AAN71964.1| putative axi 1 protein from Nicotiana tabacum [Arabidopsis thaliana] gb|AEC09474.1| O-fuc 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative auxin-independent growth promoter 1.356e-22
Complete
sp_v3.0_unigene10406 SustainPine v3.0 446
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene10411 SustainPine v3.0 781
AutoFact: transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] gb|AAL09795.1| At1g27840/F28L5_15 [Arabidopsis thaliana] gb|AAL66962.1| unknown protein [Arabidopsis thaliana] gb|AAM20274.1| unknown protein [Arabidopsis thaliana] gb|AEE30881.1| transduci 4.99983e-42
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
N-terminus
sp_v3.0_unigene10574 SustainPine v3.0 354
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9RZN7_RICCO 7.00649e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative WD-40 repeat protein 8.709e-07
Internal
sp_v3.0_unigene10578 SustainPine v3.0 3522
AutoFact: Cellulose synthase catalytic subunit n=1 Tax=Pinus taeda RepID=Q5DI94_PINTA 0.0
FL-Next: tr=Cellulose synthase catalytic subunit; Pinus taeda (Loblolly pine). 0.0
Sma3: Cellulose synthase 0.0
Complete
sp_v3.0_unigene10601 SustainPine v3.0 475
AutoFact: putative cleavage stimulation factor subunit 1 [Sorghum bicolor] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative cleavage stimulation factor subunit 1 4.169e-09
Putative N-terminus
sp_v3.0_unigene10602 SustainPine v3.0 2477
AutoFact: RING-H2 finger protein RHG1a-like n=1 Tax=Oryza sativa Japonica Group RepID=Q5N7R4_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr7 scaffold_20, whole genome shotgun sequence 5.257e-07
Complete
sp_v3.0_unigene10787 SustainPine v3.0 641
AutoFact: PREDICTED: similar to Tetratricopeptide-like helical n=1 Tax=Vitis vinifera RepID=UPI0001984A05 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Tetratricopeptide-like helical 8.306e-12
Putative C-terminus
sp_v3.0_unigene10987 SustainPine v3.0 2541
AutoFact: O-fucosyltransferase family protein [Arabidopsis thaliana] gb|AAC67324.1| similar to axi 1 protein from Nicotiana tabacum [Arabidopsis thaliana] gb|AAM13108.1| similar to axi 1 protein [Arabidopsis thaliana] gb|AAM91218.1| similar to axi 1 protein [Arabid 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Growth regulator like protein 7.177e-15
Complete
sp_v3.0_unigene10995 SustainPine v3.0 499
AutoFact: aluminum-activated malate transporter 9 [Arabidopsis thaliana] sp|Q9LS46.1|ALMT9_ARATH RecName: Full=Aluminum-activated malate transporter 9; Short=AtALMT9 dbj|BAB01110.1| unnamed protein product [Arabidopsis thaliana] gb|AAM20514.1| unknown protein [Arab 1.0e-29
FL-Next: sp=Aluminum-activated malate transporter 9; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene11055 SustainPine v3.0 748
AutoFact: Endo-1,4-beta-glucanase n=1 Tax=Dimocarpus longan RepID=C7EC58_9ROSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Endo-1,4-beta-glucanase, putative 1.945e-38
N-terminus
sp_v3.0_unigene11092 SustainPine v3.0 1374
AutoFact: 3-ketoacyl-CoA synthase n=2 Tax=Malpighiales RepID=B9IBF7_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Beta-ketoacyl-coa synthase family protein 1.41531e-43
Complete
sp_v3.0_unigene11158 SustainPine v3.0 1723
AutoFact: pfam00400, WD40, WD domain, G-beta repeat 1.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: WD-repeat protein, putative 2.346e-14
Putative Complete
sp_v3.0_unigene11203 SustainPine v3.0 346
AutoFact: O-fucosyltransferase family protein [Arabidopsis thaliana] gb|AED97925.1| O-fucosyltransferase family protein [Arabidopsis thaliana] 1.99993e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Growth regulator like protein 4.611e-18
Internal
sp_v3.0_unigene11321 SustainPine v3.0 841
AutoFact: mutant Niemann-Pick C1 [Felis catus] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Cholesterol transport protein 3.335e-09
C-terminus
sp_v3.0_unigene11361 SustainPine v3.0 794
AutoFact: Beta-galactosidase n=1 Tax=Picea sitchensis RepID=A9NUR2_PICSI 0.0
FL-Next: sp=Beta-galactosidase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Beta-galactosidase 0.0
Internal
sp_v3.0_unigene11368 SustainPine v3.0 1388
AutoFact: pfam12854, PPR_1, PPR repeat 1.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide, putative, expressed 2.5e-10
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain