Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: WD40 repeat, conserved site

Term: IPR019775  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene196224 SustainPine v3.0 546
AutoFact: coatomer alpha subunit-like protein [Lotus japonicus] 4.0e-10
FL-Next: sp=Coatomer subunit alpha-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Coatomer subunit alpha-2 1.803e-08
Putative N-terminus
sp_v3.0_unigene196643 SustainPine v3.0 590
AutoFact: Pentatricopeptide repeat protein 79 (Fragment) n=2 Tax=Funariaceae RepID=F5CAE5_FUNHY 6.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative pentatricopeptide (PPR) repeat-containing protein 8.346e-06
Putative C-terminus
sp_v3.0_unigene196777 SustainPine v3.0 298
AutoFact: Malectin/receptor-like protein kinase [Arabidopsis thaliana] sp|Q9SJT0.1|Y2214_ARATH RecName: Full=Probable receptor-like protein kinase At2g21480; Flags: Precursor gb|AAD23692.1| putative protein kinase [Arabidopsis thaliana] gb|AEC07184.1| Malectin/rece 4.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pto-like serine/threonine kinase 5.232e-15
Internal
sp_v3.0_unigene196901 SustainPine v3.0 324
AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Picea abies RepID=B3U1V0_PICAB 7.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat protein 0.0
Internal
sp_v3.0_unigene197323 SustainPine v3.0 279
AutoFact: F20B17.5 n=1 Tax=Arabidopsis thaliana RepID=Q9MA13_ARATH 6.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Receptor protein kinase-like 1.176e-09
Internal
sp_v3.0_unigene197432 SustainPine v3.0 366
AutoFact: pfam12799, LRR_4, Leucine Rich repeats (2 copies) 9.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine-threonine protein kinase, plant-type, putative 1.473e-08
Internal
sp_v3.0_unigene197589 SustainPine v3.0 155
AutoFact: F-box and wd40 domain protein, putative n=1 Tax=Ricinus communis RepID=B9S2J3_RICCO 3.0e-14
FL-Next: tr=F-box and wd40 domain protein, putative; Ricinus communis (Castor bean). 0.0
Sma3: F-box and wd40 domain protein, putative 3.321e-13
Internal
sp_v3.0_unigene198267 SustainPine v3.0 505
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9RVD2_RICCO 9.00054e-42
FL-Next: sp=Topless-related protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene198581 SustainPine v3.0 397
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070 gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana] gb|AEC07259.1| pentatricopeptide repe 2.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat protein 1.4013e-45
C-terminus
sp_v3.0_unigene199066 SustainPine v3.0 428
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LNU6.2|PPR53_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g20230 gb|AEE29953.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] 1.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat protein 5.619e-36
C-terminus
sp_v3.0_unigene199091 SustainPine v3.0 315
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene199659 SustainPine v3.0 471
AutoFact: Guanine nucleotide-binding protein subunit beta-2-like protein (Fragment) n=1 Tax=Angiostrongylus cantonensis RepID=F5GTH9_9BILA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Guanine nucleotide-binding protein subunit beta-like protein 2.996e-18
N-terminus
sp_v3.0_unigene199813 SustainPine v3.0 246
AutoFact: Notchless protein homolog 1 (Fragment) n=3 Tax=Euteleostei RepID=C0PUL3_SALSA 1.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Wd-40 repeat family protein/notchless protein 5.028e-09
Putative Complete
sp_v3.0_unigene200080 SustainPine v3.0 538
AutoFact: PREDICTED: WD repeat-containing protein 16-like n=1 Tax=Anolis carolinensis RepID=UPI0002038817 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene200239 SustainPine v3.0 456
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative pentatricopeptide (PPR) repeat-containing protein 7.003e-09
C-terminus
sp_v3.0_unigene200321 SustainPine v3.0 338
AutoFact: Calreticulin n=15 Tax=Ixodes RepID=Q64K74_IXOSC 2.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Calreticulin 3.084e-31
N-terminus
sp_v3.0_unigene200402 SustainPine v3.0 522
AutoFact: Coronin n=1 Tax=Naegleria gruberi RepID=D2VLM1_NAEGR 3.0e-39
FL-Next: tr=Putative uncharacterized protein; Ectocarpus siliculosus (Brown alga). 0.0
Internal
sp_v3.0_unigene200651 SustainPine v3.0 357
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Picea abies RepID=Q9FY09_PICAB 3.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 9.288e-16
Internal
sp_v3.0_unigene200922 SustainPine v3.0 357
AutoFact: PREDICTED: similar to putative sulfate transporter n=1 Tax=Vitis vinifera RepID=UPI0001982FFB 7.0e-18
FL-Next: sp=Molybdate transporter 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Putative sulfate transporter 2.572e-14
Internal
sp_v3.0_unigene201119 SustainPine v3.0 397
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat protein 3.388e-31
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain