Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: WD40 repeat, conserved site

Term: IPR019775  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene189378 SustainPine v3.0 681
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: WD-repeat protein, putative 8.705e-12
C-terminus
sp_v3.0_unigene189466 SustainPine v3.0 669
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
N-terminus
sp_v3.0_unigene189513 SustainPine v3.0 667
• AutoFact: Cytosolic glycoprotein FP21 n=2 Tax=Dictyosteliida RepID=D3B7B4_POLPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Fimbriata-associated protein 8.007e-23
Complete
sp_v3.0_unigene189613 SustainPine v3.0 310
• AutoFact: Unassigned protein
• FL-Next: sp=Topless-related protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene189938 SustainPine v3.0 252
• AutoFact: GH15450 n=1 Tax=Drosophila grimshawi RepID=B4J2E2_DROGR 2.0e-21
• FL-Next: tr=Eukaryotic translation initiation factor 5A 4; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: eIF-5A-2 7.147e-16
Putative C-terminus
sp_v3.0_unigene190447 SustainPine v3.0 659
• AutoFact: Guanine nucleotide-binding protein n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9CG32_9EUKA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Guanine nucleotide-binding protein subunit beta-like protein 2.744e-18
C-terminus
sp_v3.0_unigene190450 SustainPine v3.0 343
• AutoFact: U3 snoRNP-associated protein Utp7 n=1 Tax=Ectocarpus siliculosus RepID=D7FNZ6_ECTSI 1.0e-18
• FL-Next: tr=U3 snoRNP-associated protein Utp7; Ectocarpus siliculosus (Brown alga). 0.0
Internal
sp_v3.0_unigene190527 SustainPine v3.0 492
• AutoFact: Ubiquitin carrier protein (Fragment) n=1 Tax=Leucoagaricus gongylophorus RepID=E7D8R0_LEUGO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 0.0
Putative Complete
sp_v3.0_unigene190581 SustainPine v3.0 331
• AutoFact: PREDICTED: similar to block of proliferation 1 n=1 Tax=Hydra magnipapillata RepID=UPI0001926A5E 9.0e-37
• FL-Next: sp=Ribosome biogenesis protein BOP1 homolog; Chlamydomonas reinhardtii (Chlamydomonas smithii). 0.0
• Sma3: Putative WD-40 repeat protein 5.991e-07
Internal
sp_v3.0_unigene190639 SustainPine v3.0 365
• AutoFact: Eukaryotic initiation factor 4A-III n=1 Tax=Caligus clemensi RepID=C1C237_9MAXI 3.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 9.226e-09
N-terminus
sp_v3.0_unigene190952 SustainPine v3.0 314
• AutoFact: 3-ketoacyl-CoA synthase n=1 Tax=Picea sitchensis RepID=D5AD26_PICSI 3.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Beta-ketoacyl-coa synthase family protein 8.26766e-44
Putative C-terminus
sp_v3.0_unigene191246 SustainPine v3.0 483
• AutoFact: Eukaryotic initiation factor 4A-III, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0N6A8_PHYIT 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 3.282e-09
C-terminus
sp_v3.0_unigene191383 SustainPine v3.0 534
• AutoFact: Probable eukaryotic initiation factor 4A n=5 Tax=Trypanosoma RepID=IF4A_TRYBB 7.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 2 4.041e-08
C-terminus
sp_v3.0_unigene191515 SustainPine v3.0 390
• AutoFact: putative peptidyl-prolyl cis-trans isomerase [Gossypium hirsutum] 3.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene191521 SustainPine v3.0 409
• AutoFact: Pre-mRNA splicing factor n=1 Tax=Cucumis melo subsp. melo RepID=E5GBJ7_CUCME 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene191700 SustainPine v3.0 501
• AutoFact: Ubiquitin-activating enzyme E1 (Fragment) n=1 Tax=Pediculus humanus corporis RepID=E0VPA2_PEDHC 4.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin-activating enzyme E1 0.0
Internal
sp_v3.0_unigene191919 SustainPine v3.0 494
• AutoFact: GTP-binding regulatory protein beta chain homolog-Ch (ISS) n=2 Tax=Ostreococcus RepID=Q00X27_OSTTA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Guanine nucleotide-binding protein subunit beta-like protein 2.555e-18
C-terminus
sp_v3.0_unigene191995 SustainPine v3.0 551
• AutoFact: PREDICTED: WD repeat-containing protein 33 [Equus caballus] 2.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene192341 SustainPine v3.0 533
• AutoFact: Cytosolic glycoprotein FP21 n=2 Tax=Dictyosteliida RepID=D3B7B4_POLPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Fimbriata-associated protein 4.935e-23
Complete
sp_v3.0_unigene192390 SustainPine v3.0 699
• AutoFact: S-phase kinase-associated protein 1A n=2 Tax=root RepID=D0MV20_PHYIT 5.99994e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Kinetochore protein 1.238e-12
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain