Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: WD40 repeat, conserved site

Term: IPR019775  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene9267 SustainPine v3.0 3577
• AutoFact: Periodic tryptophan protein-associated region; WD40-like [Medicago truncatula] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene9285 SustainPine v3.0 2030
• AutoFact: UVB-resistance protein UVR8 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene9396 SustainPine v3.0 1384
• AutoFact: Senescence-associated protein n=1 Tax=Elaeis guineensis RepID=B3TLS7_ELAGV 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative senescence-associated protein 1.68e-10
Complete
sp_v3.0_unigene9453 SustainPine v3.0 1715
• AutoFact: Endo-beta-1,4-glucanase n=1 Tax=Pinus radiata RepID=O64402_PINRA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Endo-1,4-beta-glucanase 6.282e-36
C-terminus
sp_v3.0_unigene9528 SustainPine v3.0 1413
• AutoFact: Cf-2.1 [Solanum pimpinellifolium] gb|AAX19019.1| Cf-2.1 [Solanum pimpinellifolium] prf||2207203A Cf-2 gene 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Flagellin-sensing 2-like protein 7.187e-37
Internal
sp_v3.0_unigene9649 SustainPine v3.0 590
• AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] emb|CAB41313.1| putative protein [Arabidopsis thaliana] gb|AAP37694.1| At3g51930 [Arabidopsis thaliana] dbj|BAF00246.1| hypothetical protein [Arabidopsis thaliana] gb|AEE78864.1| transducin/ 2.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: F-box and wd40 domain protein, putative 5.014e-07
Putative C-terminus
sp_v3.0_unigene9686 SustainPine v3.0 2466
• AutoFact: OSJNBa0058K23.10 protein n=4 Tax=Oryza sativa RepID=Q7XTU2_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Kelch motif family protein 9.547e-13
Complete
sp_v3.0_unigene9702 SustainPine v3.0 396
• AutoFact: Cell division cycle, putative n=1 Tax=Ricinus communis RepID=B9S1Y4_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cell division cycle, putative 2.068e-10
Internal
sp_v3.0_unigene9789 SustainPine v3.0 2431
• AutoFact: putative bHLH transcription factor [Arabidopsis thaliana] 1.4013e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: BHLH transcription factor 1.373e-17
Complete
sp_v3.0_unigene9839 SustainPine v3.0 2689
• AutoFact: F-box family protein n=1 Tax=Populus trichocarpa RepID=B9GJS6_POPTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Kelch motif family protein 6.865e-13
Complete
sp_v3.0_unigene9911 SustainPine v3.0 903
• AutoFact: WD40 repeat protein [Ipomoea purpurea] dbj|BAE94399.1| WD40 repeat protein [Ipomoea nil] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: WD40 repeat protein 2.039e-16
C-terminus
sp_v3.0_unigene10066 SustainPine v3.0 525
• AutoFact: Prolyl oligopeptidase family protein [Arabidopsis thaliana] dbj|BAB08935.1| protease-like [Arabidopsis thaliana] gb|AED98284.1| Prolyl oligopeptidase family protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
• Sma3: Oligopeptidase B, putative 1.647e-08
C-terminus
sp_v3.0_unigene10098 SustainPine v3.0 2582
• AutoFact: Serine/threonine-protein phosphatase (Fragment) n=5 Tax=Magnoliophyta RepID=D7T1Q5_VITVI 0.0
• FL-Next: sp=Serine/threonine-protein phosphatase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Serine/threonine protein phosphatase 0.0
Complete
sp_v3.0_unigene10119 SustainPine v3.0 438
• AutoFact: glycine-rich protein [Arabidopsis thaliana] ref|NP_001190893.1| glycine-rich protein [Arabidopsis thaliana] ref|NP_001190894.1| glycine-rich protein [Arabidopsis thaliana] gb|AEE86144.1| glycine-rich protein [Arabidopsis thaliana] gb|AEE86145.1| glycine-r 6.0e-36
• FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
Internal
sp_v3.0_unigene10167 SustainPine v3.0 1842
• AutoFact: Receptor-like kinase n=1 Tax=Marchantia polymorpha RepID=A7VM36_MARPO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene10200 SustainPine v3.0 1756
• AutoFact: Peptide chain release factor 1 [Arabidopsis thaliana] gb|ABN04796.1| At2g47020 [Arabidopsis thaliana] gb|AEC10789.1| Peptide chain release factor 1 [Arabidopsis thaliana] 0.0
• FL-Next: tr=At2g47020; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Putative peptide chain release factor 2.005e-12
C-terminus
sp_v3.0_unigene10277 SustainPine v3.0 2443
• AutoFact: Nucleotide binding protein, putative n=1 Tax=Ricinus communis RepID=B9SKL2_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene10317 SustainPine v3.0 1538
• AutoFact: Serine/threonine-specific protein kinase, putative n=1 Tax=Ricinus communis RepID=B9S9Z6_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Somatic embryogenesis receptor kinase, putative 1.303e-09
Putative N-terminus
sp_v3.0_unigene10323 SustainPine v3.0 534
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
Internal
sp_v3.0_unigene10357 SustainPine v3.0 1440
• AutoFact: DNA-directed RNA polymerase beta chain, putative n=1 Tax=Ricinus communis RepID=B9RR32_RICCO 4.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: BHLH transcription factor 3.807e-15
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain