Sustainpine_db
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Name: WD40 repeat, conserved site

Term: IPR019775  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene167116 SustainPine v3.0 104
• AutoFact: leucine-rich repeat protein kinase-like protein [Arabidopsis thaliana] dbj|BAC42504.1| unknown protein [Arabidopsis thaliana] gb|ACN59279.1| leucine-rich repeat receptor-like protein kinase [Arabidopsis thaliana] gb|AEE36273.1| leucine-rich repeat protein 2.0e-09
• FL-Next: tr=Uncharacterized protein; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
• Sma3: Receptor protein kinase-like 7.45e-10
Internal
sp_v3.0_unigene167146 SustainPine v3.0 347
• AutoFact: wall-associated kinase 4-like [Oryza sativa Japonica Group] dbj|BAG94677.1| unnamed protein product [Oryza sativa Japonica Group] 1.0e-32
• FL-Next: tr=Uncharacterized protein; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
• Sma3: Wall-associated kinase, putative 4.135e-23
Internal
sp_v3.0_unigene167149 SustainPine v3.0 205
• AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RKG4_RICCO 3.0e-25
• FL-Next: tr=ATP binding protein, putative; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene167218 SustainPine v3.0 188
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070 gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana] gb|AEC07259.1| pentatricopeptide repe 2.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative pentatricopeptide (PPR) repeat-containing protein 1.31e-06
C-terminus
sp_v3.0_unigene167471 SustainPine v3.0 255
• AutoFact: WD40 repeat-containing protein [Dictyostelium discoideum AX4] sp|Q55FJ2.1|WDR91_DICDI RecName: Full=WD repeat-containing protein 91 homolog gb|EAL73495.1| WD40 repeat-containing protein [Dictyostelium discoideum AX4] 1.0e-12
• FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene167489 SustainPine v3.0 227
• AutoFact: PREDICTED: LOW QUALITY PROTEIN: guanine nucleotide-binding protein subunit beta-2-like 1-like n=5 Tax=Amniota RepID=UPI0001D62689 2.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene167500 SustainPine v3.0 176
• AutoFact: Unassigned protein 0.0001
unknown
sp_v3.0_unigene167558 SustainPine v3.0 323
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat protein 1.13e-28
C-terminus
sp_v3.0_unigene167606 SustainPine v3.0 229
• AutoFact: putative WD-40 repeat protein family [Oryza sativa Japonica Group] dbj|BAD30810.1| WD-40 repeat protein-like [Oryza sativa Japonica Group] 4.0e-25
• FL-Next: sp=Notchless protein homolog; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative C-terminus
sp_v3.0_unigene167715 SustainPine v3.0 256
• AutoFact: transcription factor DcMYB3-1 [Daucus carota] 2.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: MYB transcription factor 3.106e-27
N-terminus
sp_v3.0_unigene167719 SustainPine v3.0 146
• AutoFact: CTP synthase-like protein [Arabidopsis thaliana] gb|AEE31280.1| CTP synthase-like protein [Arabidopsis thaliana] 6.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: CTP synthase 3.051e-35
Putative N-terminus
sp_v3.0_unigene167723 SustainPine v3.0 172
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Tetratricopeptide-like helical 4.951e-10
Internal
sp_v3.0_unigene167828 SustainPine v3.0 328
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170 emb|CAB36791.1| putative protein [Arabidopsis thaliana] emb|CAB80034.1| putative protein [Arabid 2.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide (PPR) repeat-containing protein-like 5.206e-10
C-terminus
sp_v3.0_unigene167864 SustainPine v3.0 310
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat protein 6.594e-31
C-terminus
sp_v3.0_unigene167916 SustainPine v3.0 324
• AutoFact: Putaive copia-like retrotransposon polyprotein, 5'-partial (Fragment) n=2 Tax=Oryza sativa RepID=Q8W5D1_ORYSA 3.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 7.34e-35
Internal
sp_v3.0_unigene167981 SustainPine v3.0 281
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 5.693e-11
Internal
sp_v3.0_unigene168045 SustainPine v3.0 196
• AutoFact: wall-associated kinase 4-like [Oryza sativa Japonica Group] dbj|BAG94677.1| unnamed protein product [Oryza sativa Japonica Group] 4.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Wall-associated kinase, putative 4.118e-14
Internal
sp_v3.0_unigene168172 SustainPine v3.0 276
• AutoFact: SKP1 n=1 Tax=Pellia endiviifolia (species B) RepID=C9WCK3_9MARC 2.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Fimbriata-associated protein 1.077e-13
Internal
sp_v3.0_unigene168216 SustainPine v3.0 174
• AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Pellia epiphylla RepID=B3U1Q7_9MARC 1.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat protein 0.0
Internal
sp_v3.0_unigene168243 SustainPine v3.0 226
• AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Picea abies RepID=B3U1V1_PICAB 2.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain