Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: WD40 repeat, conserved site

Term: IPR019775  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene165741 SustainPine v3.0 223
• AutoFact: Nucleosome remodeling factor, p48 subunit n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RJC1_PHYPA 4.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nucleosome/chromatin assembly factor group 1.937e-09
Internal
sp_v3.0_unigene165755 SustainPine v3.0 384
• AutoFact: SCF ubiquitin ligase n=4 Tax=Picea RepID=Q3ZDI8_PICAB 2.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Kinetochore protein 9.158e-15
Complete
sp_v3.0_unigene165807 SustainPine v3.0 188
• AutoFact: protein TOPLESS [Arabidopsis thaliana] ref|NP_849672.1| protein TOPLESS [Arabidopsis thaliana] ref|NP_001031050.1| protein TOPLESS [Arabidopsis thaliana] ref|NP_001031051.1| protein TOPLESS [Arabidopsis thaliana] sp|Q94AI7.1|TPL_ARATH RecName: Full=Protei 8.0e-12
• FL-Next: sp=Protein TOPLESS; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene165866 SustainPine v3.0 460
• AutoFact: Serine/threonine protein kinase-like protein n=1 Tax=Glycine max RepID=C6ZRY6_SOYBN 6.02558e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Protein kinase APK1B, chloroplast, putative 1.19e-31
Internal
sp_v3.0_unigene165883 SustainPine v3.0 541
• AutoFact: acetate--CoA ligase [Cryptococcus neoformans var. neoformans JEC21] ref|XP_777637.1| hypothetical protein CNBA7580 [Cryptococcus neoformans var. neoformans B-3501A] gb|EAL22990.1| hypothetical protein CNBA7580 [Cryptococcus neoformans var. neoformans B-35 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Acetyl CoA synthetase 1.385e-20
Putative C-terminus
sp_v3.0_unigene166154 SustainPine v3.0 449
• AutoFact: Cell cycle arrest protein BUB3 n=2 Tax=Arabidopsis RepID=Q9LJN8_ARATH 7.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Mitotic checkpoint protein, putative 1.017e-12
C-terminus
sp_v3.0_unigene166259 SustainPine v3.0 469
• AutoFact: Phosphoglycerate kinase n=4 Tax=Pleosporineae RepID=B2VTC1_PYRTR 0.0
• FL-Next: sp=Phosphoglycerate kinase; Pinus pinaster (Maritime pine). 0.0
• Sma3: Phosphoglycerate kinase 0.0
C-terminus
sp_v3.0_unigene166268 SustainPine v3.0 411
• AutoFact: Pentatricopeptide repeat protein 79 (Fragment) n=2 Tax=Funariaceae RepID=F5CAE5_FUNHY 2.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat protein 0.0
C-terminus
sp_v3.0_unigene166339 SustainPine v3.0 222
• AutoFact: Receptor-like kinase n=1 Tax=Marchantia polymorpha RepID=A7VM40_MARPO 1.0e-21
• FL-Next: tr=Uncharacterized protein; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
• Sma3: Kinase, putative 1.3e-13
Internal
sp_v3.0_unigene166429 SustainPine v3.0 384
• AutoFact: Act-Frag_cataly domain containing protein 0.0001
• FL-Next: Isoform 2 of Dual specificity protein phosphatase PHS1 OS=Arabidopsis thaliana GN=PHS1 0.0
N-terminus
sp_v3.0_unigene166567 SustainPine v3.0 368
• AutoFact: putative pentatricopeptide (PPR) repeat-containing protein [Oryza sativa Japonica Group] 1.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative pentatricopeptide (PPR) repeat-containing protein 6.165e-14
Internal
sp_v3.0_unigene166579 SustainPine v3.0 438
• AutoFact: WD-40 repeat family protein [Arabidopsis thaliana] dbj|BAB09017.1| unnamed protein product [Arabidopsis thaliana] gb|AAL15328.1| AT5g67320/K8K14_4 [Arabidopsis thaliana] gb|AAN28871.1| At5g67320/K8K14_4 [Arabidopsis thaliana] gb|AED98328.1| WD-40 repeat f 3.0e-11
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene166597 SustainPine v3.0 469
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat protein 0.0
C-terminus
sp_v3.0_unigene166646 SustainPine v3.0 475
• AutoFact: Hcr2-0B n=1 Tax=Solanum lycopersicum RepID=Q9ZTJ9_SOLLC 7.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Flagellin-sensing 2-like protein 6.369e-35
Internal
sp_v3.0_unigene166712 SustainPine v3.0 339
• AutoFact: WD40 domain containing protein 3.0e-05
• FL-Next: sp=Transcriptional corepressor LEUNIG; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene166736 SustainPine v3.0 516
• AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Picea abies RepID=B3U1V0_PICAB 2.8026e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat protein 3.388e-33
C-terminus
sp_v3.0_unigene167002 SustainPine v3.0 251
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 3.191e-23
Putative N-terminus
sp_v3.0_unigene167034 SustainPine v3.0 130
• AutoFact: Niemann-Pick C1 protein n=2 Tax=Arabidopsis RepID=F4I9G5_ARATH 4.0e-15
• FL-Next: tr=Predicted protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
• Sma3: Cholesterol transport protein 3.114e-09
Internal
sp_v3.0_unigene167035 SustainPine v3.0 331
• AutoFact: Sulfate transporter like protein n=4 Tax=Brassicaceae RepID=Q0WP36_ARATH 8.00001e-41
• FL-Next: Isoform 2 of Molybdate transporter 2 OS=Arabidopsis thaliana GN=MOT2 0.0
• Sma3: Putative sulfate transporter 2.707e-14
Internal
sp_v3.0_unigene167069 SustainPine v3.0 131
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain