Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: WD40 repeat, conserved site

Term: IPR019775  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene8441 SustainPine v3.0 1789
AutoFact: protein kinase APK1B [Arabidopsis thaliana] gb|AEC08191.1| protein kinase APK1B [Arabidopsis thaliana] 0.0
FL-Next: sp=Protein kinase APK1B, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Protein kinase APK1B, chloroplast, putative 8.85e-35
Complete
sp_v3.0_unigene8442 SustainPine v3.0 2666
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] gb|AAK50098.1|AF372960_1 AT3g15470/MJK13_13 [Arabidopsis thaliana] gb|AAF35413.1| unknown protein [Arabidopsis thaliana] dbj|BAB02376.1| WD-40 repeat protein-like [Arabidopsis thaliana] gb|A 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: WD-repeat protein, putative 3.187e-14
C-terminus
sp_v3.0_unigene8470 SustainPine v3.0 2541
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9SRX4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene8488 SustainPine v3.0 996
AutoFact: putative inositol polyphosphate 5-phosphatase [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene8550 SustainPine v3.0 1534
AutoFact: cysteine-rich receptor-like protein kinase 6 [Arabidopsis thaliana] sp|Q9C5S9.1|CRK6_ARATH RecName: Full=Cysteine-rich receptor-like protein kinase 6; Short=Cysteine-rich RLK6; AltName: Full=Receptor-like protein kinase 5; Flags: Precursor gb|AAK28316.1|A 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome undetermined scaffold_278, whole genome shotgun sequence 3.101e-15
Complete
sp_v3.0_unigene8553 SustainPine v3.0 1935
AutoFact: Endo-1,4-beta-glucanase n=1 Tax=Dimocarpus longan RepID=C7EC60_9ROSI 0.0
FL-Next: tr=Endo-beta-1,4-glucanase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Sma3: Endo-1,4-beta-glucanase, putative 1.627e-38
Complete
sp_v3.0_unigene8560 SustainPine v3.0 2342
AutoFact: Heparanase-like protein 2 n=4 Tax=Andropogoneae RepID=B6SRR5_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Heparanase-like protein 3 1.942e-12
Complete
sp_v3.0_unigene8606 SustainPine v3.0 1097
AutoFact: Beta-galactosidase (Fragment) n=1 Tax=Vitis vinifera RepID=D7SWF1_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Beta-galactosidase 0.0
C-terminus
sp_v3.0_unigene8788 SustainPine v3.0 434
AutoFact: WD-40 repeat protein [Solanum lycopersicum] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
N-terminus
sp_v3.0_unigene8823 SustainPine v3.0 610
AutoFact: putative protein kinase Xa21, receptor type precursor [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Flagellin-sensing 2-like protein 1.562e-14
Internal
sp_v3.0_unigene8836 SustainPine v3.0 3936
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QXM6_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.6e-31
Complete
sp_v3.0_unigene8850 SustainPine v3.0 3822
AutoFact: coatomer subunit alpha-2 [Arabidopsis thaliana] sp|Q9SJT9.1|COPA2_ARATH RecName: Full=Coatomer subunit alpha-2; AltName: Full=Alpha-coat protein 2; Short=Alpha-COP 2 gb|AAD23699.1| coatomer alpha subunit [Arabidopsis thaliana] dbj|BAF00596.1| coatomer alp 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Coatomer subunit alpha-2 3.002e-08
C-terminus
sp_v3.0_unigene8905 SustainPine v3.0 1670
AutoFact: WD-repeat protein GhTTG2 [Gossypium hirsutum] gb|AAM95644.1| WD-repeat protein GhTTG2 [Gossypium hirsutum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: WD-repeat protein GhTTG2 0.0
Complete
sp_v3.0_unigene8910 SustainPine v3.0 2105
AutoFact: Receptor-like kinase n=1 Tax=Marchantia polymorpha RepID=A7VM23_MARPO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: FERONIA receptor-like kinase 1.189e-17
Misassembled
sp_v3.0_unigene8999 SustainPine v3.0 694
AutoFact: COP1 homolog [Solanum lycopersicum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: COP1 9.329e-11
Putative C-terminus
sp_v3.0_unigene9022 SustainPine v3.0 2243
AutoFact: N-acetyltransferase [Arabidopsis thaliana] gb|ABU62813.1| cohesion establishment factor 7 [Arabidopsis thaliana] gb|AEE85905.1| N-acetyltransferase [Arabidopsis thaliana] 0.0
FL-Next: tr=cDNA, clone: J065201C14, full insert sequence; Oryza sativa subsp. japonica (Rice). 0.0
Complete
sp_v3.0_unigene9069 SustainPine v3.0 2172
AutoFact: Pentatricopeptide repeat protein 79 (Fragment) n=2 Tax=Funariaceae RepID=F5CAE5_FUNHY 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative pentatricopeptide (PPR) repeat-containing protein 1.289e-16
Complete
sp_v3.0_unigene9087 SustainPine v3.0 1296
AutoFact: cell cycle arrest protein BUB3 [Arabidopsis thaliana] dbj|BAB02543.1| mitotic checkpoint protein [Arabidopsis thaliana] gb|AAM64953.1| mitotic checkpoint protein, putative [Arabidopsis thaliana] gb|AAO42274.1| putative mitotic checkpoint protein [Arabidop 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene9195 SustainPine v3.0 1005
AutoFact: Heparanase, putative n=1 Tax=Ricinus communis RepID=B9T602_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Heparanase-like protein 3 1.6e-12
C-terminus
sp_v3.0_unigene9204 SustainPine v3.0 1110
AutoFact: protein kinase domain-containing protein [Arabidopsis thaliana] ref|NP_974270.1| protein kinase domain-containing protein [Arabidopsis thaliana] gb|AAF23252.1|AC015985_10 putative protein kinase [Arabidopsis thaliana] gb|AAM14067.1| putative protein kinas 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein kinase APK1B, chloroplast, putative 3.976e-38
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain