Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: WD40 repeat

Term: IPR001680  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene29372 SustainPine v3.0 563
• AutoFact: Receptor-like cytosolic serine/threonine-protein kinase RBK2 n=2 Tax=Arabidopsis RepID=RBK2_ARATH 2.99878e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP binding protein, putative 6.315e-07
Complete
sp_v3.0_unigene29373 SustainPine v3.0 3403
• AutoFact: embryo sac development arrest 7 protein [Arabidopsis thaliana] emb|CAB72169.1| putative protein [Arabidopsis thaliana] gb|AAL47467.1| AT3g56990/F24I3_70 [Arabidopsis thaliana] gb|AEE79596.1| embryo sac development arrest 7 protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Complete
sp_v3.0_unigene29376 SustainPine v3.0 627
• AutoFact: Protein translocase subunit secA (Fragment) n=2 Tax=Vitis vinifera RepID=E0CR18_VITVI 1.0e-38
• FL-Next: Isoform 2 of Protein translocase subunit SECA2, chloroplastic OS=Arabidopsis thaliana GN=SECA2 0.0
• Sma3: Protein translocase subunit secA 2.239e-16
C-terminus
sp_v3.0_unigene29795 SustainPine v3.0 2195
• AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] ref|NP_001189878.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] gb|AAK82560.1| AT3g13340/MDC11_13 [Arabidopsis thaliana] gb|AAM98109.1| At3g13340/MDC11_13 [Arabidopsis t 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: WD-repeat protein-like 2.809e-13
Complete
sp_v3.0_unigene30166 SustainPine v3.0 1690
• AutoFact: WD-repeat protein GhTTG2 [Gossypium hirsutum] gb|AAM95644.1| WD-repeat protein GhTTG2 [Gossypium hirsutum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene30589 SustainPine v3.0 2086
• AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] gb|AAK92820.1| unknown protein [Arabidopsis thaliana] gb|AAL08286.1| AT4g18900/F13C5_70 [Arabidopsis thaliana] gb|AAM44990.1| unknown protein [Arabidopsis thaliana] gb|AEE84104.1| transducin 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Periodic tryptophan protein 1 4.49e-09
Complete
sp_v3.0_unigene30986 SustainPine v3.0 597
• AutoFact: Ribosomal protein L21 n=1 Tax=Lepidochitona cinerea RepID=E3P7F3_9MOLL 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L21 5.947e-07
Complete
sp_v3.0_unigene31038 SustainPine v3.0 664
• AutoFact: Eukaryotic translation initiation factor 5A n=2 Tax=Caligus RepID=C1BMM4_9MAXI 0.0
• FL-Next: tr=Eukaryotic translation initiation factor 5A 4; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Eukaryotic translation initiation factor 5A 3.437e-28
Complete
sp_v3.0_unigene31200 SustainPine v3.0 583
• AutoFact: 60S ribosomal protein L21-1 n=1 Tax=Phytophthora infestans T30-4 RepID=D0MS26_PHYIT 2.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L21 3.777e-10
Complete
sp_v3.0_unigene31211 SustainPine v3.0 542
• AutoFact: Eukaryotic translation initiation factor 5A-3 n=2 Tax=Arabidopsis RepID=IF5A3_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Eukaryotic translation initiation factor 5A 5.2e-28
Complete
sp_v3.0_unigene31393 SustainPine v3.0 608
• AutoFact: Eukaryotic translation initiation factor eif-5a n=1 Tax=Grosmannia clavigera kw1407 RepID=F0X8Y3_GROCL 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Eukaryotic translation initiation factor 5A 6.102e-28
Complete
sp_v3.0_unigene31450 SustainPine v3.0 926
• AutoFact: cinnamoyl-CoA reductase-like protein [Arabidopsis thaliana] 1.4013e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cinnamoyl-CoA reductase, putative 1.529e-06
C-terminus
sp_v3.0_unigene31456 SustainPine v3.0 667
• AutoFact: 60S ribosomal protein L21 n=3 Tax=Sclerotiniaceae RepID=A6SQK5_BOTFB 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L21 3.126e-10
Complete
sp_v3.0_unigene31525 SustainPine v3.0 407
• AutoFact: 60S ribosomal protein L21 n=1 Tax=Cyanophora paradoxa RepID=RL21_CYAPA 2.00386e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L21 4.034e-10
N-terminus
sp_v3.0_unigene31532 SustainPine v3.0 537
• AutoFact: Eukaryotic translation initiation factor 5A n=2 Tax=Caligus RepID=C1BMM4_9MAXI 1.0e-35
• FL-Next: tr=Eukaryotic translation initiation factor 5A; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Eukaryotic translation initiation factor 5A 5.705e-17
Putative Complete
sp_v3.0_unigene31543 SustainPine v3.0 552
• AutoFact: 60S ribosomal protein L21 n=1 Tax=Cyanophora paradoxa RepID=RL21_CYAPA 1.4013e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L21 3.904e-10
Complete
sp_v3.0_unigene31688 SustainPine v3.0 600
• AutoFact: Glutamate-rich WD repeat-containing protein n=1 Tax=Phytophthora infestans T30-4 RepID=D0NE32_PHYIT 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene31771 SustainPine v3.0 364
• AutoFact: 60S ribosomal protein L21 n=3 Tax=Sclerotiniaceae RepID=A6SQK5_BOTFB 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L21 3.591e-10
N-terminus
sp_v3.0_unigene31896 SustainPine v3.0 654
• AutoFact: GTP-binding regulatory protein beta chain homolog-Ch (ISS) [Ostreococcus tauri] emb|CAL56484.1| GTP-binding regulatory protein beta chain homolog-Ch (ISS) [Ostreococcus tauri] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Guanine nucleotide-binding protein subunit beta-like protein 2.648e-18
C-terminus
sp_v3.0_unigene31901 SustainPine v3.0 403
• AutoFact: Guanine nucleotide-binding protein subunit beta-like protein n=5 Tax=Chlamydomonadales RepID=GBLP_CHLRE 2.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Guanine nucleotide-binding protein subunit beta-like protein 2.555e-18
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain